Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD13P35453 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD13P35453 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 SNORD66.1-201ENST00000391230 76 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXD13P35453 MIR1911-201ENST00000410783 80 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD13P35453 HMGB1P45-201ENST00000435986 653 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD13P35453 RPL23AP52-201ENST00000439311 478 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 RPL23AP15-201ENST00000450202 459 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 snoU13.1-201ENST00000459157 104 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 AC079804.1-201ENST00000461922 436 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 RPL7P22-201ENST00000466005 733 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 AC013356.1-201ENST00000489027 564 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXD13P35453 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD13P35453 AC119751.1-201ENST00000513357 765 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 IGLVIV-65-201ENST00000517313 360 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
HOXD13P35453 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD13P35453 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD13P35453 AL161713.1-201ENST00000555538 145 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD13P35453 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD13P35453 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD13P35453 MIR4458-201ENST00000578872 75 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 BPTFP1-201ENST00000579209 492 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXD13P35453 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD13P35453 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXD13P35453 AP006248.2-201ENST00000623309 592 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 AC139713.2-210ENST00000641741 992 ntBASIC4.79□□□□□ -1.64
HOXD13P35453 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXD13P35453 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD13P35453 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD13P35453 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXD13P35453 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
HOXD13P35453 ERCC6-202ENST00000374127 1782 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC025031.4-201ENST00000621248 3271 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXD13P35453 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 RNU6-236P-201ENST00000363886 106 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 MIR620-201ENST00000385232 95 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 RNU6-1176P-201ENST00000390955 107 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 HDGFP1-201ENST00000405943 252 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 VN1R8P-201ENST00000407739 893 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 SNORA11F-201ENST00000408237 128 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AC096533.1-201ENST00000411645 353 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 NRBF2P2-201ENST00000413087 861 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 LIPT1P1-201ENST00000415870 1186 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 TAF13P2-201ENST00000416876 286 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AL009174.1-201ENST00000426577 416 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXD13P35453 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 ABCF2P2-201ENST00000450549 296 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 AC126121.1-201ENST00000482313 553 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AC012158.1-204ENST00000483430 465 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXD13P35453 RNU6-488P-201ENST00000515918 99 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD13P35453 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC124068.1-201ENST00000563131 678 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXD13P35453 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC115621.1-201ENST00000604653 858 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AL008729.2-201ENST00000606393 473 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AC090948.1-201ENST00000607464 549 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AC000123.2-201ENST00000623124 461 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 AP000843.1-201ENST00000624880 701 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD13P35453 AL121594.5-201ENST00000631724 573 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXD13P35453 AC013437.2-201ENST00000639587 677 ntBASIC4.78□□□□□ -1.64
HOXD13P35453 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HOXD13P35453 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXD13P35453 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms