Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AP002001.2-201ENST00000529025 1469 ntBASIC3.86□□□□□ -1.79
RPA3P35244 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPA3P35244 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
RPA3P35244 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.85□□□□□ -1.79
RPA3P35244 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPA3P35244 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
RPA3P35244 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.85□□□□□ -1.79
RPA3P35244 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RPA3P35244 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.85□□□□□ -1.79
RPA3P35244 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.85□□□□□ -1.79
RPA3P35244 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.85□□□□□ -1.79
RPA3P35244 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 SEC63P1-201ENST00000425785 1258 ntBASIC3.85□□□□□ -1.79
RPA3P35244 AL117339.2-201ENST00000430475 180 ntBASIC3.85□□□□□ -1.79
RPA3P35244 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.85□□□□□ -1.79
RPA3P35244 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 AC084198.1-201ENST00000477747 402 ntBASIC3.85□□□□□ -1.79
RPA3P35244 AC068587.1-201ENST00000483613 781 ntBASIC3.85□□□□□ -1.79
RPA3P35244 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 AC108471.1-201ENST00000513977 287 ntBASIC3.85□□□□□ -1.79
RPA3P35244 RN7SKP209-201ENST00000516888 304 ntBASIC3.85□□□□□ -1.79
RPA3P35244 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.85□□□□□ -1.79
RPA3P35244 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.85□□□□□ -1.79
RPA3P35244 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.85□□□□□ -1.79
RPA3P35244 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.85□□□□□ -1.79
RPA3P35244 AC120057.2-201ENST00000571520 271 ntBASIC3.85□□□□□ -1.79
RPA3P35244 AC115989.2-201ENST00000578640 563 ntBASIC3.85□□□□□ -1.79
RPA3P35244 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.85□□□□□ -1.79
RPA3P35244 AC016717.3-201ENST00000624730 554 ntBASIC3.85□□□□□ -1.79
RPA3P35244 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.85□□□□□ -1.79
RPA3P35244 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPA3P35244 CYP1D1P-201ENST00000416662 1433 ntBASIC3.85□□□□□ -1.79
RPA3P35244 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPA3P35244 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RPA3P35244 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.85□□□□□ -1.79
RPA3P35244 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RPA3P35244 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RPA3P35244 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
RPA3P35244 CASC19-284ENST00000642142 1868 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AL451142.2-201ENST00000429076 2090 ntBASIC3.84□□□□□ -1.79
RPA3P35244 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RPA3P35244 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RPA3P35244 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.84□□□□□ -1.79
RPA3P35244 MOB1AP1-201ENST00000430903 535 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.84□□□□□ -1.79
RPA3P35244 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.84□□□□□ -1.79
RPA3P35244 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.84□□□□□ -1.79
RPA3P35244 MTCO3P17-201ENST00000443775 513 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AC103987.1-201ENST00000473394 348 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AC093267.1-201ENST00000489176 961 ntBASIC3.84□□□□□ -1.79
RPA3P35244 RNA5SP179-201ENST00000517284 121 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.84□□□□□ -1.79
RPA3P35244 TOMM20P2-201ENST00000540082 421 ntBASIC3.84□□□□□ -1.79
RPA3P35244 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.84□□□□□ -1.79
RPA3P35244 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.84□□□□□ -1.79
RPA3P35244 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.84□□□□□ -1.79
RPA3P35244 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.84□□□□□ -1.79
RPA3P35244 AC090953.1-201ENST00000604305 1092 ntBASIC3.84□□□□□ -1.79
RPA3P35244 Z82195.1-201ENST00000604558 398 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AP005212.4-201ENST00000614206 710 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RPA3P35244 RMST_5.1-201ENST00000618704 126 ntBASIC3.84□□□□□ -1.79
RPA3P35244 MIR6500-201ENST00000622700 86 ntBASIC3.84□□□□□ -1.79
RPA3P35244 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.84□□□□□ -1.79
RPA3P35244 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.84□□□□□ -1.79
RPA3P35244 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.84□□□□□ -1.79
RPA3P35244 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RPA3P35244 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
RPA3P35244 AC073073.2-201ENST00000609827 2578 ntBASIC3.84□□□□□ -1.8
RPA3P35244 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RPA3P35244 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RPA3P35244 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RPA3P35244 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
RPA3P35244 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.83□□□□□ -1.8
RPA3P35244 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RPA3P35244 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
RPA3P35244 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RPA3P35244 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RPA3P35244 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RPA3P35244 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPA3P35244 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RPA3P35244 MIR372-201ENST00000362225 67 ntBASIC3.83□□□□□ -1.8
RPA3P35244 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.83□□□□□ -1.8
RPA3P35244 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.83□□□□□ -1.8
RPA3P35244 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.83□□□□□ -1.8
RPA3P35244 AC127526.1-201ENST00000417526 366 ntBASIC3.83□□□□□ -1.8
RPA3P35244 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.83□□□□□ -1.8
RPA3P35244 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.83□□□□□ -1.8
RPA3P35244 TBCAP1-201ENST00000436520 327 ntBASIC3.83□□□□□ -1.8
RPA3P35244 RPS29P31-201ENST00000446147 164 ntBASIC3.83□□□□□ -1.8
RPA3P35244 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.83□□□□□ -1.8
RPA3P35244 NUTF2P7-201ENST00000453086 375 ntBASIC3.83□□□□□ -1.8
RPA3P35244 PPIAP15-201ENST00000479662 484 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms