Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
COL4A5P29400 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL4A5P29400 RNA5SP197-201ENST00000363357 119 ntBASIC4.28□□□□□ -1.72
COL4A5P29400 AL691447.1-201ENST00000419456 387 ntBASIC4.28□□□□□ -1.72
COL4A5P29400 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.28□□□□□ -1.72
COL4A5P29400 RNF19BPX-201ENST00000426224 625 ntBASIC4.28□□□□□ -1.72
COL4A5P29400 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.28□□□□□ -1.72
COL4A5P29400 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.28□□□□□ -1.72
COL4A5P29400 TRBV12-2-201ENST00000489763 344 ntBASIC4.28□□□□□ -1.72
COL4A5P29400 PTGES3P3-201ENST00000511479 482 ntBASIC4.28□□□□□ -1.72
COL4A5P29400 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.28□□□□□ -1.72
COL4A5P29400 AL049840.6-202ENST00000603373 279 ntBASIC4.28□□□□□ -1.72
COL4A5P29400 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL4A5P29400 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.27□□□□□ -1.73
COL4A5P29400 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL4A5P29400 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL4A5P29400 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL4A5P29400 FRG1CP-201ENST00000358464 769 ntBASIC4.27□□□□□ -1.73
COL4A5P29400 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL4A5P29400 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.27□□□□□ -1.73
COL4A5P29400 GSTM3P2-201ENST00000412746 530 ntBASIC4.27□□□□□ -1.73
COL4A5P29400 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.27□□□□□ -1.73
COL4A5P29400 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL4A5P29400 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
COL4A5P29400 AC010655.1-201ENST00000449336 292 ntBASIC4.27□□□□□ -1.73
COL4A5P29400 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
COL4A5P29400 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.27□□□□□ -1.73
COL4A5P29400 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.27□□□□□ -1.73
COL4A5P29400 AC097462.2-201ENST00000504623 481 ntBASIC4.27□□□□□ -1.73
COL4A5P29400 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.27□□□□□ -1.73
COL4A5P29400 IGHV3-32-201ENST00000519182 355 ntBASIC4.27□□□□□ -1.73
COL4A5P29400 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.27□□□□□ -1.73
COL4A5P29400 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.27□□□□□ -1.73
COL4A5P29400 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
COL4A5P29400 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.27□□□□□ -1.73
COL4A5P29400 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL4A5P29400 AC007656.2-201ENST00000624902 4547 ntBASIC4.27□□□□□ -1.73
COL4A5P29400 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL4A5P29400 AC063979.1-201ENST00000415539 377 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A5P29400 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A5P29400 BTG4P1-201ENST00000510421 183 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A5P29400 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A5P29400 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A5P29400 MTND6P33-201ENST00000571794 183 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 AC067852.3-201ENST00000589177 561 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 AC124312.4-201ENST00000605533 310 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 AC107294.1-201ENST00000609524 467 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A5P29400 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL4A5P29400 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A5P29400 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
COL4A5P29400 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL4A5P29400 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A5P29400 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL4A5P29400 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL4A5P29400 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL4A5P29400 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A5P29400 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A5P29400 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A5P29400 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.26□□□□□ -1.73
COL4A5P29400 MRPL35P4-201ENST00000453682 566 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.26□□□□□ -1.73
COL4A5P29400 AP001992.1-205ENST00000462248 379 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 S100A11P2-201ENST00000467589 312 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 RNA5SP341-201ENST00000516261 117 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 Vault.1-201ENST00000516474 102 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 CR383656.14-201ENST00000551951 406 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 AC103968.1-201ENST00000557841 573 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.26□□□□□ -1.73
COL4A5P29400 MIR4433B-201ENST00000581329 102 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A5P29400 CKS1BP3-201ENST00000600888 237 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.26□□□□□ -1.73
COL4A5P29400 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.26□□□□□ -1.73
COL4A5P29400 AC138932.5-201ENST00000617759 563 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 AC138965.3-201ENST00000623875 498 ntBASIC4.26□□□□□ -1.73
COL4A5P29400 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 AL645937.1-201ENST00000641739 1652 ntBASIC4.25□□□□□ -1.73
COL4A5P29400 SAGE2P-201ENST00000420011 2126 ntBASIC4.25□□□□□ -1.73
COL4A5P29400 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 AC233263.6-201ENST00000631132 1963 ntBASIC4.25□□□□□ -1.73
COL4A5P29400 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
COL4A5P29400 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL4A5P29400 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.25□□□□□ -1.73
COL4A5P29400 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL4A5P29400 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A5P29400 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms