Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC093510.2-201ENST00000562820 896 ntBASIC3.83□□□□□ -1.8
GDF1P27539 AGGF1P6-201ENST00000569213 976 ntBASIC3.83□□□□□ -1.8
GDF1P27539 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.83□□□□□ -1.8
GDF1P27539 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.83□□□□□ -1.8
GDF1P27539 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.83□□□□□ -1.8
GDF1P27539 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.83□□□□□ -1.8
GDF1P27539 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.83□□□□□ -1.8
GDF1P27539 AC019278.1-201ENST00000623516 479 ntBASIC3.83□□□□□ -1.8
GDF1P27539 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.83□□□□□ -1.8
GDF1P27539 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.83□□□□□ -1.8
GDF1P27539 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
GDF1P27539 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
GDF1P27539 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GDF1P27539 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
GDF1P27539 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.83□□□□□ -1.8
GDF1P27539 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.82□□□□□ -1.8
GDF1P27539 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 RNA5SP479-201ENST00000364858 117 ntBASIC3.82□□□□□ -1.8
GDF1P27539 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.82□□□□□ -1.8
GDF1P27539 AL603766.1-201ENST00000407763 664 ntBASIC3.82□□□□□ -1.8
GDF1P27539 MIR1193-201ENST00000408109 78 ntBASIC3.82□□□□□ -1.8
GDF1P27539 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.82□□□□□ -1.8
GDF1P27539 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.82□□□□□ -1.8
GDF1P27539 AL606495.1-201ENST00000422100 813 ntBASIC3.82□□□□□ -1.8
GDF1P27539 VN1R42P-201ENST00000424651 344 ntBASIC3.82□□□□□ -1.8
GDF1P27539 AL160175.1-201ENST00000428124 247 ntBASIC3.82□□□□□ -1.8
GDF1P27539 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.82□□□□□ -1.8
GDF1P27539 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.82□□□□□ -1.8
GDF1P27539 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.82□□□□□ -1.8
GDF1P27539 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.82□□□□□ -1.8
GDF1P27539 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.82□□□□□ -1.8
GDF1P27539 SYT14P1-201ENST00000481459 721 ntBASIC3.82□□□□□ -1.8
GDF1P27539 AC104164.2-201ENST00000496953 495 ntBASIC3.82□□□□□ -1.8
GDF1P27539 AC025459.1-201ENST00000504072 156 ntBASIC3.82□□□□□ -1.8
GDF1P27539 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.82□□□□□ -1.8
GDF1P27539 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.82□□□□□ -1.8
GDF1P27539 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.82□□□□□ -1.8
GDF1P27539 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.82□□□□□ -1.8
GDF1P27539 C1DP5-201ENST00000525775 383 ntBASIC3.82□□□□□ -1.8
GDF1P27539 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.82□□□□□ -1.8
GDF1P27539 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.82□□□□□ -1.8
GDF1P27539 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.82□□□□□ -1.8
GDF1P27539 AC084757.1-201ENST00000559987 490 ntBASIC3.82□□□□□ -1.8
GDF1P27539 AL020997.2-201ENST00000602607 184 ntBASIC3.82□□□□□ -1.8
GDF1P27539 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 AC068880.4-201ENST00000623082 495 ntBASIC3.82□□□□□ -1.8
GDF1P27539 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.82□□□□□ -1.8
GDF1P27539 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.82□□□□□ -1.8
GDF1P27539 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.82□□□□□ -1.8
GDF1P27539 MIR492-201ENST00000638676 116 ntBASIC3.82□□□□□ -1.8
GDF1P27539 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
GDF1P27539 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.82□□□□□ -1.8
GDF1P27539 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDF1P27539 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 USP9YP4-201ENST00000424401 1745 ntBASIC3.81□□□□□ -1.8
GDF1P27539 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
GDF1P27539 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 AC083899.2-201ENST00000423285 1376 ntBASIC3.81□□□□□ -1.8
GDF1P27539 SPRR2C-201ENST00000290702 219 ntBASIC3.81□□□□□ -1.8
GDF1P27539 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
GDF1P27539 RNU6-244P-201ENST00000391028 104 ntBASIC3.81□□□□□ -1.8
GDF1P27539 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 AL355143.1-201ENST00000407101 841 ntBASIC3.81□□□□□ -1.8
GDF1P27539 RNA5SP317-201ENST00000410176 116 ntBASIC3.81□□□□□ -1.8
GDF1P27539 RNU6-628P-201ENST00000410675 107 ntBASIC3.81□□□□□ -1.8
GDF1P27539 RNA5SP311-201ENST00000411290 116 ntBASIC3.81□□□□□ -1.8
GDF1P27539 XKRYP4-201ENST00000414395 483 ntBASIC3.81□□□□□ -1.8
GDF1P27539 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.81□□□□□ -1.8
GDF1P27539 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 MRPL50P1-201ENST00000431951 384 ntBASIC3.81□□□□□ -1.8
GDF1P27539 AC092013.1-201ENST00000438795 332 ntBASIC3.81□□□□□ -1.8
GDF1P27539 MTCYBP12-201ENST00000440559 1134 ntBASIC3.81□□□□□ -1.8
GDF1P27539 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDF1P27539 HMGN1P5-201ENST00000448591 263 ntBASIC3.81□□□□□ -1.8
GDF1P27539 XKRYP5-201ENST00000449659 483 ntBASIC3.81□□□□□ -1.8
GDF1P27539 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms