Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 MTND2P13-201ENST00000577438 1039 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.27□□□□□ -1.89
COL8A2P25067 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.27□□□□□ -1.89
COL8A2P25067 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 AC107021.2-201ENST00000567714 2095 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.27□□□□□ -1.89
COL8A2P25067 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
COL8A2P25067 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL8A2P25067 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.26□□□□□ -1.89
COL8A2P25067 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.26□□□□□ -1.89
COL8A2P25067 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
COL8A2P25067 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL8A2P25067 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL8A2P25067 RNA5SP124-201ENST00000362739 110 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL8A2P25067 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL8A2P25067 MIR670-201ENST00000390142 98 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.26□□□□□ -1.89
COL8A2P25067 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.26□□□□□ -1.89
COL8A2P25067 AC018644.1-201ENST00000429934 551 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AC083863.1-201ENST00000438811 231 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.26□□□□□ -1.89
COL8A2P25067 RPS20P21-201ENST00000466859 343 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 RPL31P61-201ENST00000496160 376 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
COL8A2P25067 SCARNA14-201ENST00000516903 136 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 IGLVIV-53-201ENST00000520107 367 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.26□□□□□ -1.89
COL8A2P25067 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL8A2P25067 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL8A2P25067 UBTFL9-201ENST00000534504 1148 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 GNRHR2P1-201ENST00000555315 631 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AC074050.1-201ENST00000563247 211 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.26□□□□□ -1.89
COL8A2P25067 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.26□□□□□ -1.89
COL8A2P25067 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.26□□□□□ -1.89
COL8A2P25067 MIR92B-201ENST00000607575 96 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AP005212.4-201ENST00000614206 710 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AC112200.1-201ENST00000625015 234 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 AC012442.3-202ENST00000636742 206 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
COL8A2P25067 AC134882.1-201ENST00000603738 1676 ntBASIC3.26□□□□□ -1.89
COL8A2P25067 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.26□□□□□ -1.89
COL8A2P25067 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.26□□□□□ -1.89
COL8A2P25067 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
COL8A2P25067 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL8A2P25067 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
COL8A2P25067 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.25□□□□□ -1.89
COL8A2P25067 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.25□□□□□ -1.89
COL8A2P25067 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
COL8A2P25067 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL8A2P25067 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
COL8A2P25067 PNPT1P2-201ENST00000456768 2050 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 AP004289.2-201ENST00000444413 1457 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 U1.1-201ENST00000384101 164 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 U8.11-201ENST00000384699 133 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 U8.12-201ENST00000384701 133 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 RNA5SP171-201ENST00000391071 115 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 RPL5P19-201ENST00000404228 893 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 ZNF602P-201ENST00000405929 924 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.25□□□□□ -1.89
COL8A2P25067 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.25□□□□□ -1.89
COL8A2P25067 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL8A2P25067 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.25□□□□□ -1.89
COL8A2P25067 UBE2V2P1-201ENST00000434717 398 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 Z74696.2-201ENST00000436514 498 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.25□□□□□ -1.89
COL8A2P25067 U8.18-201ENST00000459285 133 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 AC091564.1-201ENST00000464563 479 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.25□□□□□ -1.89
COL8A2P25067 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.25□□□□□ -1.89
COL8A2P25067 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.25□□□□□ -1.89
COL8A2P25067 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL8A2P25067 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.25□□□□□ -1.89
COL8A2P25067 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL8A2P25067 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.25□□□□□ -1.89
COL8A2P25067 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.25□□□□□ -1.89
COL8A2P25067 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL8A2P25067 MIR4444-1-201ENST00000581696 74 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 FAM106CP-201ENST00000582212 507 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 MIR4444-2-201ENST00000584390 74 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.25□□□□□ -1.89
COL8A2P25067 AC005344.1-201ENST00000613391 459 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.25□□□□□ -1.89
COL8A2P25067 AC233309.1-201ENST00000619522 751 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 AF001550.2-201ENST00000636643 217 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 MIR6715B-201ENST00000637172 77 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.25□□□□□ -1.89
COL8A2P25067 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL8A2P25067 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.25□□□□□ -1.89
COL8A2P25067 AC022893.2-201ENST00000564832 3296 ntBASIC3.25□□□□□ -1.89
COL8A2P25067 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
COL8A2P25067 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL8A2P25067 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms