Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
USF1P22415 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
USF1P22415 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
USF1P22415 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.59□□□□□ -1.84
USF1P22415 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
USF1P22415 RHOT1P2-201ENST00000366423 333 ntBASIC3.58□□□□□ -1.84
USF1P22415 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USF1P22415 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.58□□□□□ -1.84
USF1P22415 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.58□□□□□ -1.84
USF1P22415 RNU4-31P-201ENST00000384211 141 ntBASIC3.58□□□□□ -1.84
USF1P22415 RN7SKP235-201ENST00000410662 305 ntBASIC3.58□□□□□ -1.84
USF1P22415 RN7SKP182-201ENST00000410772 298 ntBASIC3.58□□□□□ -1.84
USF1P22415 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
USF1P22415 AL160175.1-201ENST00000428124 247 ntBASIC3.58□□□□□ -1.84
USF1P22415 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.58□□□□□ -1.84
USF1P22415 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
USF1P22415 MTCO1P52-201ENST00000433928 531 ntBASIC3.58□□□□□ -1.84
USF1P22415 AL031663.1-201ENST00000437445 219 ntBASIC3.58□□□□□ -1.84
USF1P22415 RPL7P28-201ENST00000437739 740 ntBASIC3.58□□□□□ -1.84
USF1P22415 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.58□□□□□ -1.84
USF1P22415 RPL21P89-201ENST00000444021 467 ntBASIC3.58□□□□□ -1.84
USF1P22415 RPL5P32-201ENST00000454085 879 ntBASIC3.58□□□□□ -1.84
USF1P22415 AC079804.1-201ENST00000461922 436 ntBASIC3.58□□□□□ -1.84
USF1P22415 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
USF1P22415 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.58□□□□□ -1.84
USF1P22415 AC011037.1-201ENST00000483964 558 ntBASIC3.58□□□□□ -1.84
USF1P22415 SUMO1P1-201ENST00000497904 306 ntBASIC3.58□□□□□ -1.84
USF1P22415 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.58□□□□□ -1.84
USF1P22415 AC099522.1-202ENST00000514718 367 ntBASIC3.58□□□□□ -1.84
USF1P22415 AC007424.1-203ENST00000554613 687 ntBASIC3.58□□□□□ -1.84
USF1P22415 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.58□□□□□ -1.84
USF1P22415 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.58□□□□□ -1.84
USF1P22415 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USF1P22415 RN7SL600P-201ENST00000581811 299 ntBASIC3.58□□□□□ -1.84
USF1P22415 MIR548Y-201ENST00000582739 110 ntBASIC3.58□□□□□ -1.84
USF1P22415 AC006130.2-201ENST00000586202 326 ntBASIC3.58□□□□□ -1.84
USF1P22415 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.58□□□□□ -1.84
USF1P22415 ABI1P1-201ENST00000603375 1120 ntBASIC3.58□□□□□ -1.84
USF1P22415 MIR6867-201ENST00000610636 67 ntBASIC3.58□□□□□ -1.84
USF1P22415 LINC00216-201ENST00000623548 1126 ntBASIC3.58□□□□□ -1.84
USF1P22415 AC010608.2-201ENST00000624830 470 ntBASIC3.58□□□□□ -1.84
USF1P22415 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
USF1P22415 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
USF1P22415 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USF1P22415 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
USF1P22415 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.58□□□□□ -1.84
USF1P22415 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
USF1P22415 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
USF1P22415 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
USF1P22415 AC067945.1-201ENST00000342609 618 ntBASIC3.57□□□□□ -1.84
USF1P22415 RNU1-15P-201ENST00000353977 144 ntBASIC3.57□□□□□ -1.84
USF1P22415 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
USF1P22415 RNU6-317P-201ENST00000384031 107 ntBASIC3.57□□□□□ -1.84
USF1P22415 ENSAP1-201ENST00000392855 326 ntBASIC3.57□□□□□ -1.84
USF1P22415 RN7SKP33-201ENST00000410942 340 ntBASIC3.57□□□□□ -1.84
USF1P22415 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.57□□□□□ -1.84
USF1P22415 AC007529.1-201ENST00000418574 2178 ntBASIC3.57□□□□□ -1.84
USF1P22415 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.57□□□□□ -1.84
USF1P22415 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.57□□□□□ -1.84
USF1P22415 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.57□□□□□ -1.84
USF1P22415 EXTL2P1-201ENST00000446218 416 ntBASIC3.57□□□□□ -1.84
USF1P22415 RPL23AP81-201ENST00000455252 467 ntBASIC3.57□□□□□ -1.84
USF1P22415 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.57□□□□□ -1.84
USF1P22415 AP000926.1-201ENST00000479573 241 ntBASIC3.57□□□□□ -1.84
USF1P22415 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
USF1P22415 AP002812.1-201ENST00000495378 474 ntBASIC3.57□□□□□ -1.84
USF1P22415 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
USF1P22415 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.57□□□□□ -1.84
USF1P22415 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.57□□□□□ -1.84
USF1P22415 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.57□□□□□ -1.84
USF1P22415 IGHV3-32-201ENST00000519182 355 ntBASIC3.57□□□□□ -1.84
USF1P22415 AL352979.3-201ENST00000553515 247 ntBASIC3.57□□□□□ -1.84
USF1P22415 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.57□□□□□ -1.84
USF1P22415 RPL23AP97-201ENST00000568955 471 ntBASIC3.57□□□□□ -1.84
USF1P22415 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.57□□□□□ -1.84
USF1P22415 MIR4429-201ENST00000580105 73 ntBASIC3.57□□□□□ -1.84
USF1P22415 OR1AB1P-201ENST00000585564 761 ntBASIC3.57□□□□□ -1.84
USF1P22415 CCDC58P3-201ENST00000590792 430 ntBASIC3.57□□□□□ -1.84
USF1P22415 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.57□□□□□ -1.84
USF1P22415 VN1R84P-201ENST00000593697 235 ntBASIC3.57□□□□□ -1.84
USF1P22415 AC068790.5-201ENST00000602741 355 ntBASIC3.57□□□□□ -1.84
USF1P22415 AL133247.2-201ENST00000603236 482 ntBASIC3.57□□□□□ -1.84
USF1P22415 Z98200.1-201ENST00000607298 470 ntBASIC3.57□□□□□ -1.84
USF1P22415 AC074276.2-201ENST00000619891 348 ntBASIC3.57□□□□□ -1.84
USF1P22415 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
USF1P22415 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.57□□□□□ -1.84
USF1P22415 AC015726.3-201ENST00000624501 418 ntBASIC3.57□□□□□ -1.84
USF1P22415 AP003072.4-201ENST00000624580 310 ntBASIC3.57□□□□□ -1.84
USF1P22415 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USF1P22415 FP325313.1-201ENST00000638228 703 ntBASIC3.57□□□□□ -1.84
USF1P22415 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms