Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A1P12107 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
COL11A1P12107 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.12□□□□□ -1.75
COL11A1P12107 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.12□□□□□ -1.75
COL11A1P12107 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.12□□□□□ -1.75
COL11A1P12107 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 BDP1P-201ENST00000582658 1990 ntBASIC4.12□□□□□ -1.75
COL11A1P12107 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 FRG1CP-201ENST00000358464 769 ntBASIC4.12□□□□□ -1.75
COL11A1P12107 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A1P12107 SDCBPP2-201ENST00000424643 885 ntBASIC4.12□□□□□ -1.75
COL11A1P12107 RPL21P110-201ENST00000433345 446 ntBASIC4.12□□□□□ -1.75
COL11A1P12107 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.12□□□□□ -1.75
COL11A1P12107 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A1P12107 HMGB1P19-201ENST00000517578 577 ntBASIC4.12□□□□□ -1.75
COL11A1P12107 AC027807.1-201ENST00000559921 996 ntBASIC4.12□□□□□ -1.75
COL11A1P12107 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.12□□□□□ -1.75
COL11A1P12107 AC006077.1-201ENST00000604746 343 ntBASIC4.12□□□□□ -1.75
COL11A1P12107 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.12□□□□□ -1.75
COL11A1P12107 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.12□□□□□ -1.75
COL11A1P12107 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL11A1P12107 RNA5SP50-201ENST00000363731 107 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.11□□□□□ -1.75
COL11A1P12107 ATP5HP2-201ENST00000433885 485 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 AC006480.1-201ENST00000449887 378 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.11□□□□□ -1.75
COL11A1P12107 RNA5SP154-201ENST00000516193 111 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.11□□□□□ -1.75
COL11A1P12107 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.11□□□□□ -1.75
COL11A1P12107 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.11□□□□□ -1.75
COL11A1P12107 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL11A1P12107 AC006960.3-201ENST00000561845 705 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 AL133457.1-201ENST00000564251 987 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.11□□□□□ -1.75
COL11A1P12107 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
COL11A1P12107 ZNF833P-201ENST00000424938 1494 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL11A1P12107 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 TRBV12-2-201ENST00000489763 344 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.11□□□□□ -1.75
COL11A1P12107 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.11□□□□□ -1.75
COL11A1P12107 AC115621.1-201ENST00000604653 858 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 OR2BH1P-201ENST00000608850 864 ntBASIC4.11□□□□□ -1.75
COL11A1P12107 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.11□□□□□ -1.75
COL11A1P12107 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL11A1P12107 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
COL11A1P12107 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL11A1P12107 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL11A1P12107 AC010300.1-201ENST00000600671 5134 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL11A1P12107 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL11A1P12107 U3.39-201ENST00000408569 239 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.1□□□□□ -1.75
COL11A1P12107 AL158156.1-201ENST00000422509 473 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
COL11A1P12107 RPSAP41-201ENST00000439695 860 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 YWHAQP9-201ENST00000445891 512 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 FTH1P24-201ENST00000503502 462 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.1□□□□□ -1.75
COL11A1P12107 IGHV3-63-201ENST00000518422 341 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.1□□□□□ -1.75
COL11A1P12107 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.1□□□□□ -1.75
COL11A1P12107 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.1□□□□□ -1.75
COL11A1P12107 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.1□□□□□ -1.75
COL11A1P12107 AC106782.4-201ENST00000568264 210 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 AC023389.2-201ENST00000580031 955 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 AC074276.2-201ENST00000619891 348 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 CDY3P-201ENST00000454543 1618 ntBASIC4.1□□□□□ -1.75
COL11A1P12107 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL11A1P12107 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL11A1P12107 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL11A1P12107 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL11A1P12107 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.09□□□□□ -1.75
COL11A1P12107 SNORD74.4-201ENST00000364129 80 ntBASIC4.09□□□□□ -1.75
COL11A1P12107 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.09□□□□□ -1.75
COL11A1P12107 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.09□□□□□ -1.75
COL11A1P12107 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.09□□□□□ -1.75
COL11A1P12107 OSTCP5-201ENST00000425293 453 ntBASIC4.09□□□□□ -1.75
COL11A1P12107 AC096638.2-201ENST00000434965 711 ntBASIC4.09□□□□□ -1.75
COL11A1P12107 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.09□□□□□ -1.75
COL11A1P12107 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
COL11A1P12107 GMPSP1-201ENST00000514075 579 ntBASIC4.09□□□□□ -1.75
COL11A1P12107 MYL12AP1-201ENST00000518490 515 ntBASIC4.09□□□□□ -1.75
COL11A1P12107 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.09□□□□□ -1.75
COL11A1P12107 MRPS35P3-201ENST00000603189 709 ntBASIC4.09□□□□□ -1.75
COL11A1P12107 AC005000.2-201ENST00000605468 310 ntBASIC4.09□□□□□ -1.75
COL11A1P12107 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
COL11A1P12107 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL11A1P12107 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
COL11A1P12107 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
COL11A1P12107 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms