Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SFTPBP07988 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.94□□□□□ -1.78
SFTPBP07988 AL590240.1-201ENST00000334118 313 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 RNA5SP502-201ENST00000362694 119 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 RNA5SP513-201ENST00000364648 118 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 RNA5SP505-201ENST00000364748 108 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 RNU6-398P-201ENST00000384143 109 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 AC069282.1-201ENST00000411911 526 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC119751.6-201ENST00000416712 186 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 PAICSP7-201ENST00000419829 962 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 C4BPAP2-201ENST00000428434 478 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC005154.2-201ENST00000438110 379 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 RAB11AP1-201ENST00000442978 646 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 TPT1P12-201ENST00000448968 492 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AC108463.1-201ENST00000450258 347 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AL162388.1-201ENST00000450912 352 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 FGF7P3-201ENST00000454645 303 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AC133473.1-201ENST00000455173 299 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 snoU13.7-201ENST00000459220 104 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 RPS20P21-201ENST00000466859 343 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 RPL12P20-201ENST00000475538 479 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 RPL23AP65-201ENST00000475608 468 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC011005.3-201ENST00000491624 395 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 HPRT1P2-201ENST00000505250 544 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 RNU6-202P-201ENST00000515998 96 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AC010476.1-201ENST00000519111 851 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 AP001180.3-201ENST00000582221 145 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 AC234771.5-201ENST00000600161 514 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AC133794.1-201ENST00000602731 914 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 AP003117.2-201ENST00000606010 545 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AC026368.1-201ENST00000614934 690 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.94□□□□□ -1.78
SFTPBP07988 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.94□□□□□ -1.78
SFTPBP07988 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
SFTPBP07988 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.94□□□□□ -1.78
SFTPBP07988 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC006971.1-201ENST00000407916 4486 ntBASIC3.94□□□□□ -1.78
SFTPBP07988 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.94□□□□□ -1.78
SFTPBP07988 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SFTPBP07988 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SFTPBP07988 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.93□□□□□ -1.78
SFTPBP07988 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SFTPBP07988 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SFTPBP07988 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SFTPBP07988 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SFTPBP07988 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SFTPBP07988 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SFTPBP07988 AL391684.1-202ENST00000641293 1636 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SFTPBP07988 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.93□□□□□ -1.78
SFTPBP07988 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.93□□□□□ -1.78
SFTPBP07988 MIR298-201ENST00000401212 88 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AL355615.1-201ENST00000406187 641 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.93□□□□□ -1.78
SFTPBP07988 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.93□□□□□ -1.78
SFTPBP07988 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SFTPBP07988 NUP35P2-201ENST00000416748 943 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 BX510359.2-201ENST00000417920 305 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AC069213.2-201ENST00000420238 366 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.93□□□□□ -1.78
SFTPBP07988 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.93□□□□□ -1.78
SFTPBP07988 AC000041.1-201ENST00000439655 175 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AC069285.2-201ENST00000440210 275 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AC044797.1-201ENST00000445744 679 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 H2AFZP5-201ENST00000446960 382 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.93□□□□□ -1.78
SFTPBP07988 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.93□□□□□ -1.78
SFTPBP07988 CDC42P1-201ENST00000456658 548 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 RNU7-140P-201ENST00000459546 60 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 ATP5G1P3-201ENST00000463301 410 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 RPS17P11-201ENST00000474297 293 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AC087385.1-201ENST00000475062 312 ntBASIC3.93□□□□□ -1.78
SFTPBP07988 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms