Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SRP72P2-201ENST00000344851 1979 ntBASIC2.21□□□□□ -2.05
APOBP04114 AC005183.1-201ENST00000603687 1979 ntBASIC2.21□□□□□ -2.05
APOBP04114 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.05
APOBP04114 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC2.21□□□□□ -2.06
APOBP04114 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
APOBP04114 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC2.21□□□□□ -2.06
APOBP04114 BX890604.2-201ENST00000427883 474 ntBASIC2.21□□□□□ -2.06
APOBP04114 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 HMGB1P5-202ENST00000451497 985 ntBASIC2.21□□□□□ -2.06
APOBP04114 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.21□□□□□ -2.06
APOBP04114 RNU6-237P-201ENST00000515985 71 ntBASIC2.21□□□□□ -2.06
APOBP04114 COX6B1P6-201ENST00000522347 255 ntBASIC2.21□□□□□ -2.06
APOBP04114 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.21□□□□□ -2.06
APOBP04114 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.21□□□□□ -2.06
APOBP04114 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
APOBP04114 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.21□□□□□ -2.06
APOBP04114 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
APOBP04114 AC007685.1-201ENST00000329806 452 ntBASIC2.21□□□□□ -2.06
APOBP04114 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.21□□□□□ -2.06
APOBP04114 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.21□□□□□ -2.06
APOBP04114 AC021146.3-201ENST00000511911 260 ntBASIC2.21□□□□□ -2.06
APOBP04114 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.21□□□□□ -2.06
APOBP04114 AL512310.1-201ENST00000548639 172 ntBASIC2.21□□□□□ -2.06
APOBP04114 AC107993.1-201ENST00000591343 684 ntBASIC2.21□□□□□ -2.06
APOBP04114 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.21□□□□□ -2.06
APOBP04114 AC007656.2-201ENST00000624902 4547 ntBASIC2.21□□□□□ -2.06
APOBP04114 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
APOBP04114 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.21□□□□□ -2.06
APOBP04114 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.21□□□□□ -2.06
APOBP04114 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.21□□□□□ -2.06
APOBP04114 RPL32P28-201ENST00000443577 397 ntBASIC2.21□□□□□ -2.06
APOBP04114 SLC31A1P1-201ENST00000451221 567 ntBASIC2.21□□□□□ -2.06
APOBP04114 RPS3AP43-201ENST00000479743 781 ntBASIC2.21□□□□□ -2.06
APOBP04114 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.21□□□□□ -2.06
APOBP04114 AC091826.1-201ENST00000514065 313 ntBASIC2.21□□□□□ -2.06
APOBP04114 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.21□□□□□ -2.06
APOBP04114 KLKP1-201ENST00000595979 403 ntBASIC2.21□□□□□ -2.06
APOBP04114 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.21□□□□□ -2.06
APOBP04114 AC073073.2-201ENST00000609827 2578 ntBASIC2.21□□□□□ -2.06
APOBP04114 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
APOBP04114 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
APOBP04114 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
APOBP04114 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 SEPT7P8-201ENST00000413308 775 ntBASIC2.2□□□□□ -2.06
APOBP04114 AC097262.1-201ENST00000452559 548 ntBASIC2.2□□□□□ -2.06
APOBP04114 VN1R104P-201ENST00000505115 1009 ntBASIC2.2□□□□□ -2.06
APOBP04114 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.2□□□□□ -2.06
APOBP04114 AL590240.3-201ENST00000621416 943 ntBASIC2.2□□□□□ -2.06
APOBP04114 Z95327.2-201ENST00000414579 1873 ntBASIC2.2□□□□□ -2.06
APOBP04114 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
APOBP04114 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 RPS15AP29-201ENST00000445539 400 ntBASIC2.2□□□□□ -2.06
APOBP04114 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.2□□□□□ -2.06
APOBP04114 NPM1P17-201ENST00000479221 602 ntBASIC2.2□□□□□ -2.06
APOBP04114 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 AC015922.4-201ENST00000612568 690 ntBASIC2.2□□□□□ -2.06
APOBP04114 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.2□□□□□ -2.06
APOBP04114 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 U3.39-201ENST00000408569 239 ntBASIC2.2□□□□□ -2.06
APOBP04114 SDCBPP2-201ENST00000424643 885 ntBASIC2.2□□□□□ -2.06
APOBP04114 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 AL109933.2-201ENST00000452651 260 ntBASIC2.2□□□□□ -2.06
APOBP04114 UBA52P3-201ENST00000491303 382 ntBASIC2.2□□□□□ -2.06
APOBP04114 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.2□□□□□ -2.06
APOBP04114 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.2□□□□□ -2.06
APOBP04114 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
APOBP04114 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC2.2□□□□□ -2.06
APOBP04114 HSPA8P19-201ENST00000505359 1517 ntBASIC2.2□□□□□ -2.06
APOBP04114 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
APOBP04114 OR5H2-201ENST00000355273 945 ntBASIC2.2□□□□□ -2.06
APOBP04114 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms