Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.26□□□□□ -1.57
CNOT4O95628 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.26□□□□□ -1.57
CNOT4O95628 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CNOT4O95628 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNOT4O95628 SELENOWP1-201ENST00000322792 252 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNOT4O95628 RNU5F-6P-201ENST00000362979 116 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 RNA5SP211-201ENST00000365516 117 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 RNU6-116P-201ENST00000384042 109 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 RNU6-297P-201ENST00000384636 107 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 RNU6-876P-201ENST00000391295 104 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 RPL23AP17-201ENST00000401064 499 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 CCNG1P1-201ENST00000406783 885 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 RNU2-6P-201ENST00000411404 190 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC015977.1-201ENST00000418887 292 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNOT4O95628 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.26□□□□□ -1.57
CNOT4O95628 RPS26P40-201ENST00000435209 294 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AL022238.1-201ENST00000442557 355 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.26□□□□□ -1.57
CNOT4O95628 AL162739.1-201ENST00000450606 307 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC090602.1-201ENST00000469695 252 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 RPL7P6-201ENST00000480903 738 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC099521.1-201ENST00000482557 334 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.26□□□□□ -1.57
CNOT4O95628 RPL7P38-201ENST00000488396 739 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AL035690.1-201ENST00000490892 383 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AL136038.1-201ENST00000497246 351 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 SNX5P1-201ENST00000505757 1041 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 MTCYBP43-201ENST00000513621 740 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.26□□□□□ -1.57
CNOT4O95628 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.26□□□□□ -1.57
CNOT4O95628 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.26□□□□□ -1.57
CNOT4O95628 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.26□□□□□ -1.57
CNOT4O95628 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.26□□□□□ -1.57
CNOT4O95628 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.26□□□□□ -1.57
CNOT4O95628 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.26□□□□□ -1.57
CNOT4O95628 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNOT4O95628 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.26□□□□□ -1.57
CNOT4O95628 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.26□□□□□ -1.57
CNOT4O95628 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.26□□□□□ -1.57
CNOT4O95628 BPTFP1-201ENST00000579209 492 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC127024.5-201ENST00000580085 462 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 MIR4512-201ENST00000583257 77 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.26□□□□□ -1.57
CNOT4O95628 AC145423.1-201ENST00000605712 336 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC087045.1-201ENST00000605856 382 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AL354760.1-201ENST00000608357 643 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AL139099.4-201ENST00000614802 114 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC002553.4-201ENST00000616896 331 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 LINC01963-201ENST00000562038 3148 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CNOT4O95628 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNOT4O95628 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNOT4O95628 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CNOT4O95628 AC131971.1-201ENST00000332881 1482 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 AC005725.1-201ENST00000577346 2607 ntBASIC5.26□□□□□ -1.57
CNOT4O95628 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 AC017104.4-201ENST00000636283 1592 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.25□□□□□ -1.57
CNOT4O95628 RNU6-839P-201ENST00000363347 108 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 RNU4-2-201ENST00000365668 141 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CNOT4O95628 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CNOT4O95628 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CNOT4O95628 SNORA40.3-201ENST00000390964 122 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CNOT4O95628 OR7E101P-201ENST00000400428 513 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 GAPDHP42-201ENST00000406848 981 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 RPL23AP47-201ENST00000408017 460 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 MIR1203-201ENST00000408812 85 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 RN7SKP286-201ENST00000410894 299 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.25□□□□□ -1.57
CNOT4O95628 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 AC007742.1-201ENST00000425789 329 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 AL121776.1-201ENST00000429337 372 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.25□□□□□ -1.57
CNOT4O95628 AL731534.1-201ENST00000434711 269 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 ELOCP26-201ENST00000436067 329 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AL831737.1-201ENST00000441288 271 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNOT4O95628 DPPA3P1-201ENST00000448050 469 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 IFNWP4-201ENST00000453148 294 ntBASIC5.25□□□□□ -1.57
CNOT4O95628 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.25□□□□□ -1.57
CNOT4O95628 SLC25A51P1-201ENST00000468432 871 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms