Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.24□□□□□ -1.73
CTDNEP1O95476 BMS1P21-201ENST00000634565 365 ntBASIC4.24□□□□□ -1.73
CTDNEP1O95476 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTDNEP1O95476 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTDNEP1O95476 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTDNEP1O95476 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 RNA5SP51-201ENST00000364750 119 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTDNEP1O95476 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 RNU6-167P-201ENST00000384292 106 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTDNEP1O95476 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 AL357520.1-201ENST00000441557 453 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 RPS29P31-201ENST00000446147 164 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 AL161747.1-201ENST00000480068 358 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC092593.2-201ENST00000513866 913 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC022616.2-201ENST00000523185 300 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC115989.2-201ENST00000578640 563 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 VN1R85P-201ENST00000601587 426 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC099669.2-201ENST00000616549 437 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTDNEP1O95476 AL732618.1-201ENST00000623251 301 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 AC090971.4-201ENST00000560291 1800 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTDNEP1O95476 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CTDNEP1O95476 ASNSP1-201ENST00000518311 1939 ntBASIC4.23□□□□□ -1.73
CTDNEP1O95476 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
CTDNEP1O95476 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTDNEP1O95476 SYT14P1-202ENST00000600441 1448 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 MFSD8-220ENST00000641243 1422 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 NCSTNP1-201ENST00000406229 144 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTDNEP1O95476 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 RPL23AP12-201ENST00000467573 473 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 UBE2CP3-201ENST00000502715 450 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 AL121766.1-201ENST00000547436 487 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 CYP2C60P-201ENST00000566088 139 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 SNORD39.2-201ENST00000579995 76 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 AL713998.2-201ENST00000604538 1198 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 AL049634.3-201ENST00000604968 457 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 AL732372.2-225ENST00000642124 456 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CTDNEP1O95476 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.22□□□□□ -1.73
CTDNEP1O95476 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTDNEP1O95476 AL031985.3-201ENST00000565390 2449 ntBASIC4.22□□□□□ -1.73
CTDNEP1O95476 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CTDNEP1O95476 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CTDNEP1O95476 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTDNEP1O95476 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTDNEP1O95476 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 RN7SKP263-201ENST00000411194 309 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 DBIP2-201ENST00000419076 262 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 AC244033.1-201ENST00000426826 870 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 OR52Y1P-201ENST00000452418 828 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 AC005229.2-201ENST00000456995 399 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 APOOP2-201ENST00000461561 539 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.21□□□□□ -1.74
CTDNEP1O95476 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTDNEP1O95476 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CTDNEP1O95476 AC024941.1-201ENST00000612250 334 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 AC016957.2-201ENST00000616998 848 ntBASIC4.21□□□□□ -1.74
CTDNEP1O95476 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms