Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AL512782.1-201ENST00000603093 364 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL031320.1-201ENST00000604177 357 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AC025588.2-201ENST00000604851 466 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 IMMP1LP1-201ENST00000605170 488 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 AL391358.1-201ENST00000605342 190 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC109809.1-201ENST00000619665 545 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 AP002782.1-201ENST00000623107 614 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-2O95096 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 MAPK10-304ENST00000641341 3984 ntBASIC4.37□□□□□ -1.71
NKX2-2O95096 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NKX2-2O95096 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-2O95096 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NKX2-2O95096 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-2O95096 AC025125.1-201ENST00000624743 1922 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NKX2-2O95096 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-2O95096 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NKX2-2O95096 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NKX2-2O95096 AL136164.3-201ENST00000624429 3978 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-2O95096 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NKX2-2O95096 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-2O95096 RNU6-1066P-201ENST00000363573 105 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 RNU6-560P-201ENST00000364007 108 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 SUGT1P1-201ENST00000379514 476 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 DSTNP4-201ENST00000399472 474 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 FABP12P1-201ENST00000401911 322 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AL121978.1-201ENST00000402778 359 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AL133264.1-201ENST00000407157 562 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AL590084.1-201ENST00000407885 387 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 FCF1P2-201ENST00000415284 583 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX2-2O95096 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-2O95096 BX510359.2-201ENST00000417920 305 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-2O95096 AC004074.1-201ENST00000421810 1063 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-2O95096 GTF2IP23-201ENST00000423746 351 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 RPP40P1-201ENST00000426762 456 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX2-2O95096 USP9YP31-201ENST00000431405 881 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 RPL34P6-201ENST00000432390 345 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 B3GNT2P1-201ENST00000434960 952 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 MTND6P18-201ENST00000439477 513 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 H2AFZP5-201ENST00000446960 382 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AL034418.1-201ENST00000448675 860 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 HMGN3P1-201ENST00000453847 193 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 RFC5P1-201ENST00000454419 874 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 RPS3AP41-201ENST00000462701 778 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC108751.2-201ENST00000469993 231 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 RN7SL591P-201ENST00000496150 292 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 MTATP6P22-201ENST00000507369 598 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX2-2O95096 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-2O95096 RN7SKP276-201ENST00000516242 268 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 MRPS36P3-201ENST00000519284 130 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.36□□□□□ -1.71
NKX2-2O95096 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
NKX2-2O95096 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
NKX2-2O95096 LRRC34P1-201ENST00000542742 915 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-2O95096 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX2-2O95096 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-2O95096 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.36□□□□□ -1.71
NKX2-2O95096 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX2-2O95096 AC093519.1-201ENST00000566109 298 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.36□□□□□ -1.71
NKX2-2O95096 AC011477.5-201ENST00000586571 259 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC061975.8-201ENST00000587058 721 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-2O95096 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-2O95096 GAS5-AS1-201ENST00000602767 694 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC092106.3-201ENST00000611308 722 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC009159.2-201ENST00000617603 606 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC022509.4-201ENST00000621404 572 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 AC097520.1-201ENST00000624435 385 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-2O95096 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
NKX2-2O95096 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-2O95096 MTND5P31-201ENST00000419366 1374 ntBASIC4.36□□□□□ -1.71
NKX2-2O95096 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-2O95096 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.36□□□□□ -1.71
NKX2-2O95096 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NKX2-2O95096 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-2O95096 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-2O95096 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-2O95096 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-2O95096 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NKX2-2O95096 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NKX2-2O95096 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms