Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC023141.12-201ENST00000512399 199 ntBASIC6.51□□□□□ -1.37
CUX2O14529 RNA5SP164-201ENST00000516533 110 ntBASIC6.51□□□□□ -1.37
CUX2O14529 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.51□□□□□ -1.37
CUX2O14529 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.51□□□□□ -1.37
CUX2O14529 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC6.51□□□□□ -1.37
CUX2O14529 AC079171.1-201ENST00000568788 914 ntBASIC6.51□□□□□ -1.37
CUX2O14529 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.51□□□□□ -1.37
CUX2O14529 AL589935.2-201ENST00000616471 1231 ntBASIC6.51□□□□□ -1.37
CUX2O14529 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CUX2O14529 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.51□□□□□ -1.37
CUX2O14529 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CUX2O14529 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CUX2O14529 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
CUX2O14529 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CUX2O14529 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CUX2O14529 NR1H5P-201ENST00000452683 1377 ntBASIC6.5□□□□□ -1.37
CUX2O14529 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.5□□□□□ -1.37
CUX2O14529 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.5□□□□□ -1.37
CUX2O14529 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.5□□□□□ -1.37
CUX2O14529 AC113192.3-201ENST00000529152 742 ntBASIC6.5□□□□□ -1.37
CUX2O14529 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CUX2O14529 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.5□□□□□ -1.37
CUX2O14529 MIR3162-201ENST00000581818 82 ntBASIC6.5□□□□□ -1.37
CUX2O14529 MIR4769-201ENST00000584126 77 ntBASIC6.5□□□□□ -1.37
CUX2O14529 OR2AS2P-201ENST00000606902 342 ntBASIC6.5□□□□□ -1.37
CUX2O14529 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.5□□□□□ -1.37
CUX2O14529 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CUX2O14529 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.49□□□□□ -1.37
CUX2O14529 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
CUX2O14529 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUX2O14529 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CUX2O14529 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CUX2O14529 AC067945.1-201ENST00000342609 618 ntBASIC6.49□□□□□ -1.37
CUX2O14529 RPS23P10-201ENST00000416185 486 ntBASIC6.49□□□□□ -1.37
CUX2O14529 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.49□□□□□ -1.37
CUX2O14529 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.49□□□□□ -1.37
CUX2O14529 RPF2P1-201ENST00000424137 906 ntBASIC6.49□□□□□ -1.37
CUX2O14529 DYNLL1P7-201ENST00000429273 258 ntBASIC6.49□□□□□ -1.37
CUX2O14529 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.49□□□□□ -1.37
CUX2O14529 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.49□□□□□ -1.37
CUX2O14529 AC026782.2-201ENST00000510845 636 ntBASIC6.49□□□□□ -1.37
CUX2O14529 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.49□□□□□ -1.37
CUX2O14529 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.49□□□□□ -1.37
CUX2O14529 AC010591.1-201ENST00000603941 649 ntBASIC6.49□□□□□ -1.37
CUX2O14529 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.49□□□□□ -1.37
CUX2O14529 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.49□□□□□ -1.37
CUX2O14529 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CUX2O14529 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CUX2O14529 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.49□□□□□ -1.37
CUX2O14529 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CUX2O14529 RIOK3P1-201ENST00000418778 1528 ntBASIC6.49□□□□□ -1.37
CUX2O14529 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.49□□□□□ -1.37
CUX2O14529 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CUX2O14529 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CUX2O14529 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CUX2O14529 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
CUX2O14529 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CUX2O14529 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CUX2O14529 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUX2O14529 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.48□□□□□ -1.37
CUX2O14529 RN7SL504P-201ENST00000494496 287 ntBASIC6.48□□□□□ -1.37
CUX2O14529 RNA5SP341-201ENST00000516261 117 ntBASIC6.48□□□□□ -1.37
CUX2O14529 AC112503.1-201ENST00000608436 391 ntBASIC6.48□□□□□ -1.37
CUX2O14529 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUX2O14529 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUX2O14529 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CUX2O14529 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.48□□□□□ -1.37
CUX2O14529 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUX2O14529 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUX2O14529 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC6.48□□□□□ -1.37
CUX2O14529 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CUX2O14529 SNORA5B-201ENST00000363786 132 ntBASIC6.47□□□□□ -1.37
CUX2O14529 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.47□□□□□ -1.37
CUX2O14529 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.47□□□□□ -1.37
CUX2O14529 HIGD1AP4-201ENST00000430194 280 ntBASIC6.47□□□□□ -1.37
CUX2O14529 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.47□□□□□ -1.37
CUX2O14529 AC091862.1-201ENST00000438016 1100 ntBASIC6.47□□□□□ -1.37
CUX2O14529 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.47□□□□□ -1.37
CUX2O14529 AC016590.3-201ENST00000611171 753 ntBASIC6.47□□□□□ -1.37
CUX2O14529 AL162274.2-201ENST00000614406 332 ntBASIC6.47□□□□□ -1.37
CUX2O14529 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CUX2O14529 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CUX2O14529 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
CUX2O14529 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CUX2O14529 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
CUX2O14529 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
CUX2O14529 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.47□□□□□ -1.37
CUX2O14529 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CUX2O14529 RNU6-7-201ENST00000364784 107 ntBASIC6.47□□□□□ -1.37
CUX2O14529 RNU6-8-201ENST00000365467 107 ntBASIC6.47□□□□□ -1.37
CUX2O14529 BMS1P3-201ENST00000372011 932 ntBASIC6.47□□□□□ -1.37
CUX2O14529 HSFY4P-201ENST00000415994 1181 ntBASIC6.47□□□□□ -1.37
CUX2O14529 SETD6P1-201ENST00000444575 317 ntBASIC6.47□□□□□ -1.37
CUX2O14529 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.47□□□□□ -1.37
CUX2O14529 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.47□□□□□ -1.37
CUX2O14529 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.47□□□□□ -1.37
CUX2O14529 IGLV3-26-201ENST00000520756 302 ntBASIC6.47□□□□□ -1.37
CUX2O14529 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC6.47□□□□□ -1.37
CUX2O14529 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.47□□□□□ -1.37
CUX2O14529 OR7A8P-201ENST00000595427 913 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms