Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 AP005901.5-201ENST00000545779 1796 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM38O00635 AC011447.7-201ENST00000624228 1590 ntBASIC5.08□□□□□ -1.6
TRIM38O00635 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM38O00635 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM38O00635 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM38O00635 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM38O00635 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM38O00635 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM38O00635 RN7SKP95-201ENST00000362860 303 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 RNA5SP90-201ENST00000364801 99 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 UBBP2-201ENST00000376781 231 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 ERHP2-201ENST00000402323 299 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC019050.1-201ENST00000418508 492 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 DDX39BP1-205ENST00000422507 192 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC010099.3-201ENST00000423896 409 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 DPRXP1-201ENST00000426312 460 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 MTCO1P54-201ENST00000430139 712 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC023347.2-201ENST00000433994 462 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC008072.1-201ENST00000434254 824 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM38O00635 RPL12P46-201ENST00000436610 195 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 PPIAP17-201ENST00000438507 471 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 RPL34P20-201ENST00000442771 351 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 HMGB1P16-201ENST00000447155 540 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 NOP56P2-201ENST00000447491 769 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM38O00635 BTF3P6-201ENST00000448054 499 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC006463.2-201ENST00000473326 348 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC010683.1-201ENST00000473673 378 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 OR51K1P-201ENST00000510214 950 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC048346.1-201ENST00000510247 144 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 RN7SKP96-201ENST00000516948 297 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM38O00635 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC009097.3-201ENST00000563557 1018 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC023813.2-201ENST00000564321 469 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 MIR4716-201ENST00000579628 84 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC015688.2-201ENST00000584523 262 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC017100.2-201ENST00000584628 355 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AP001269.3-201ENST00000588718 329 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM38O00635 Z99497.2-201ENST00000603634 310 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC011626.1-201ENST00000604710 562 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AL353600.1-201ENST00000608148 251 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.07□□□□□ -1.6
TRIM38O00635 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.07□□□□□ -1.6
TRIM38O00635 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM38O00635 AP002782.1-201ENST00000623107 614 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC124312.6-202ENST00000623624 418 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM38O00635 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM38O00635 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM38O00635 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM38O00635 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM38O00635 AC093535.2-201ENST00000624769 2326 ntBASIC5.07□□□□□ -1.6
TRIM38O00635 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM38O00635 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM38O00635 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM38O00635 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM38O00635 NACA3P-201ENST00000359690 648 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 RN7SKP149-201ENST00000363008 344 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 Y_RNA.169-201ENST00000363745 96 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 RNVU1-6-201ENST00000364688 164 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 RNA5SP87-201ENST00000384155 118 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 MIR141-201ENST00000384975 95 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 SNORA68.2-201ENST00000391263 128 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 PRRC2CP1-201ENST00000404428 159 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 FCF1P5-201ENST00000406490 482 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms