Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
SOX1O00570 UGT2B27P-201ENST00000505092 1620 ntBASIC6.25□□□□□ -1.41
SOX1O00570 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 HSPA8P14-201ENST00000552265 1805 ntBASIC6.25□□□□□ -1.41
SOX1O00570 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SOX1O00570 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 RN7SKP104-201ENST00000362605 328 ntBASIC6.25□□□□□ -1.41
SOX1O00570 Y_RNA.166-201ENST00000363730 102 ntBASIC6.25□□□□□ -1.41
SOX1O00570 RN7SKP113-201ENST00000363891 295 ntBASIC6.25□□□□□ -1.41
SOX1O00570 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.25□□□□□ -1.41
SOX1O00570 MTCO3P12-201ENST00000416718 547 ntBASIC6.25□□□□□ -1.41
SOX1O00570 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.25□□□□□ -1.41
SOX1O00570 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.25□□□□□ -1.41
SOX1O00570 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.25□□□□□ -1.41
SOX1O00570 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.25□□□□□ -1.41
SOX1O00570 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.25□□□□□ -1.41
SOX1O00570 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.25□□□□□ -1.41
SOX1O00570 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.25□□□□□ -1.41
SOX1O00570 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.25□□□□□ -1.41
SOX1O00570 ACTR3P2-201ENST00000439585 1257 ntBASIC6.25□□□□□ -1.41
SOX1O00570 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.25□□□□□ -1.41
SOX1O00570 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.25□□□□□ -1.41
SOX1O00570 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.25□□□□□ -1.41
SOX1O00570 TRGVB-201ENST00000453257 471 ntBASIC6.25□□□□□ -1.41
SOX1O00570 MTND1P12-201ENST00000455231 147 ntBASIC6.25□□□□□ -1.41
SOX1O00570 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.25□□□□□ -1.41
SOX1O00570 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.25□□□□□ -1.41
SOX1O00570 RPL32P33-201ENST00000487023 394 ntBASIC6.25□□□□□ -1.41
SOX1O00570 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 AC006390.1-201ENST00000508068 283 ntBASIC6.25□□□□□ -1.41
SOX1O00570 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 AL157394.1-201ENST00000562983 1224 ntBASIC6.25□□□□□ -1.41
SOX1O00570 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.25□□□□□ -1.41
SOX1O00570 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.25□□□□□ -1.41
SOX1O00570 HMGN1P30-201ENST00000589286 268 ntBASIC6.25□□□□□ -1.41
SOX1O00570 TPMTP1-201ENST00000592307 737 ntBASIC6.25□□□□□ -1.41
SOX1O00570 AC007621.1-201ENST00000604544 437 ntBASIC6.25□□□□□ -1.41
SOX1O00570 AL451049.1-201ENST00000608672 497 ntBASIC6.25□□□□□ -1.41
SOX1O00570 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 OR1N1-202ENST00000619659 939 ntBASIC6.25□□□□□ -1.41
SOX1O00570 CASC19-221ENST00000641309 1382 ntBASIC6.25□□□□□ -1.41
SOX1O00570 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.25□□□□□ -1.41
SOX1O00570 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.25□□□□□ -1.41
SOX1O00570 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SOX1O00570 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SOX1O00570 AP002370.1-201ENST00000528055 1602 ntBASIC6.25□□□□□ -1.41
SOX1O00570 AC107980.1-201ENST00000558671 3355 ntBASIC6.24□□□□□ -1.41
SOX1O00570 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SOX1O00570 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 AC104162.1-201ENST00000430831 2382 ntBASIC6.24□□□□□ -1.41
SOX1O00570 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX1O00570 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SOX1O00570 AL121950.1-201ENST00000624993 2077 ntBASIC6.24□□□□□ -1.41
SOX1O00570 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SOX1O00570 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.24□□□□□ -1.41
SOX1O00570 GNG5P1-201ENST00000255500 204 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 SNRPEP3-201ENST00000338402 276 ntBASIC6.24□□□□□ -1.41
SOX1O00570 OR10R3P-201ENST00000361688 942 ntBASIC6.24□□□□□ -1.41
SOX1O00570 RNU6-115P-201ENST00000364310 107 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AL590290.1-201ENST00000405336 380 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AL356432.1-201ENST00000405809 419 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX1O00570 AL590139.1-201ENST00000416267 400 ntBASIC6.24□□□□□ -1.41
SOX1O00570 PDCL2P1-201ENST00000419302 352 ntBASIC6.24□□□□□ -1.41
SOX1O00570 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX1O00570 RIMKLBP2-201ENST00000424737 654 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AL445669.1-201ENST00000426743 755 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AC133104.1-201ENST00000429100 218 ntBASIC6.24□□□□□ -1.41
SOX1O00570 GTF2IP20-201ENST00000431663 360 ntBASIC6.24□□□□□ -1.41
SOX1O00570 NDUFA5P7-201ENST00000452914 242 ntBASIC6.24□□□□□ -1.41
SOX1O00570 MTCO1P42-201ENST00000457379 726 ntBASIC6.24□□□□□ -1.41
SOX1O00570 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX1O00570 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.24□□□□□ -1.41
SOX1O00570 AC139783.2-201ENST00000504847 1145 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms