Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC087385.1-201ENST00000475062 312 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 MTND3P6-201ENST00000485242 339 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 RN7SL271P-201ENST00000487601 295 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC012170.1-201ENST00000495139 359 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 SUMO1P1-201ENST00000497904 306 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 HMGB1P3-201ENST00000502802 616 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 SNORA70.14-201ENST00000516205 110 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AL121576.1-201ENST00000556055 276 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC009117.1-201ENST00000563948 554 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 ZNF92P3-201ENST00000596594 954 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 BRDTP1-201ENST00000605735 677 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 FAM25E-202ENST00000608562 189 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC006946.3-201ENST00000609791 756 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC245389.2-201ENST00000616023 576 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AP004607.9-201ENST00000618202 316 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC243756.2-201ENST00000618406 463 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC242843.1-201ENST00000618702 573 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC091953.3-201ENST00000623220 236 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AL590240.1-201ENST00000334118 313 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 MIR585-201ENST00000384887 94 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 MIR298-201ENST00000401212 88 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 RNU4-74P-201ENST00000411280 161 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 RPL23AP26-201ENST00000412728 464 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 RPL21P109-201ENST00000422213 475 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AL360081.1-201ENST00000428299 555 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AP000873.1-201ENST00000463987 400 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 RPL21P103-201ENST00000479921 488 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 SNX5P1-201ENST00000505757 1041 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 USP9YP5-201ENST00000511770 630 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 RN7SKP83-201ENST00000516512 178 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 RPL23AP87-202ENST00000573039 466 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 MIR4270-201ENST00000581799 70 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AC012417.1-201ENST00000582307 1039 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 PCNAP1-202ENST00000595299 752 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AC025175.1-201ENST00000606482 759 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AC090246.1-201ENST00000616499 426 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 MIR6853-201ENST00000619642 74 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 C2orf27A-204ENST00000623058 969 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 AL353746.1-201ENST00000566293 6881 ntBASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RBFOX3A6NFN3 MTND4P31-201ENST00000425607 1343 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 DCAF13P1-201ENST00000495256 1330 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 RN7SKP285-201ENST00000410137 318 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 RNA5SP113-201ENST00000410486 84 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC092832.1-201ENST00000422934 400 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC002075.2-201ENST00000425207 252 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 FAR2P4-202ENST00000425399 584 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms