Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL392048.1-201ENST00000613946 534 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 RPL23AP61-201ENST00000623642 466 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AC092159.4-201ENST00000624944 550 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 RNU6-40P-201ENST00000384254 107 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 MIR23B-201ENST00000384832 97 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 FAM204CP-201ENST00000424489 642 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 GOT2P5-201ENST00000433995 546 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 ELOCP8-201ENST00000439309 332 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 ELOCP15-201ENST00000442090 332 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AL035551.1-201ENST00000446931 348 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AC104306.1-201ENST00000449702 371 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AL133162.1-201ENST00000463228 453 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AC090543.1-201ENST00000492168 485 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 HAUS1P1-201ENST00000505275 832 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 ACTR6P1-201ENST00000514311 1104 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 MIR4444-1-201ENST00000581696 74 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 MIR4444-2-201ENST00000584390 74 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AC005021.1-201ENST00000608730 355 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AC019131.2-201ENST00000609071 870 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 OR8B1P-202ENST00000641132 1178 ntBASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.14□□□□□ -1.75
SMIM28A0A1B0GU29 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AL450326.2-201ENST00000421913 1962 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AL589826.1-201ENST00000340697 249 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 RNU4-7P-201ENST00000364758 141 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 NCSTNP1-201ENST00000406229 144 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AL139247.1-201ENST00000422768 325 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AL606490.7-201ENST00000433136 191 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 MTCYBP29-201ENST00000436327 1006 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AL450263.2-201ENST00000439400 589 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 RPS15AP29-201ENST00000445539 400 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AL500527.1-201ENST00000448532 255 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 RPL5P13-201ENST00000462840 709 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC021146.7-201ENST00000509604 775 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 MTND2P31-201ENST00000512602 616 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC069240.1-201ENST00000548774 375 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 SNRPGP1-201ENST00000553864 222 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 DPRXP4-201ENST00000578053 568 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC128687.2-201ENST00000609657 566 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AL162233.1-201ENST00000620014 944 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC079298.2-201ENST00000623885 459 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC112200.1-201ENST00000625015 234 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 OR5AC4P-202ENST00000642086 985 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC110792.3-201ENST00000595906 1614 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 AC083843.3-201ENST00000623679 2186 ntBASIC4.13□□□□□ -1.75
SMIM28A0A1B0GU29 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 CCNB2P1-201ENST00000399411 1150 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AL589655.1-201ENST00000405398 482 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 AL389915.1-201ENST00000422463 466 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 RPL23AP4-201ENST00000427757 463 ntBASIC4.12□□□□□ -1.75
SMIM28A0A1B0GU29 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms