Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL390237.1-201ENST00000404226 1415 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 USP9YP4-201ENST00000424401 1745 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AL118496.1-201ENST00000440201 1812 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 MIR589-201ENST00000385238 99 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 PEX12P1-201ENST00000400284 1048 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AL121978.1-201ENST00000402778 359 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 OR4K12P-201ENST00000406538 961 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC068533.2-201ENST00000411872 306 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 CEACAMP8-201ENST00000413902 580 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 Z99497.1-201ENST00000421282 135 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 MTCO3P1-205ENST00000422088 832 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AL049745.1-201ENST00000433953 286 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 KCTD10P1-201ENST00000434203 625 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC104634.1-201ENST00000452720 462 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 HMGN3P1-201ENST00000453847 193 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 GYG1P1-201ENST00000460864 698 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 UBA52P3-201ENST00000491303 382 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 ARL4AP1-201ENST00000503220 705 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 MTND3P5-201ENST00000512798 333 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC006427.1-201ENST00000514359 712 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 SERPINE4P-201ENST00000554978 281 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 TRAV15-201ENST00000556680 249 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC004987.4-201ENST00000603383 338 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC095055.1-201ENST00000603472 1113 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC008083.4-201ENST00000615076 444 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AL158063.1-201ENST00000615349 536 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AL031667.3-201ENST00000620124 655 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 MTND4P4-201ENST00000439033 1366 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 ZNF833P-201ENST00000424938 1494 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AP005435.3-201ENST00000531260 3198 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 OR55B1P-203ENST00000641518 2602 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 AC006210.2-201ENST00000367074 1545 ntBASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHB1Q9Y5F3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC008079.2-201ENST00000623543 20396 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 RNU6-500P-201ENST00000362349 107 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 OR8V1P-201ENST00000395193 873 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 FCF1P2-201ENST00000415284 583 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC062016.2-201ENST00000420950 676 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC009965.2-201ENST00000425328 970 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC093655.2-201ENST00000425735 631 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC092017.2-201ENST00000427600 362 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 NPM1P24-201ENST00000428039 894 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 MED14P1-201ENST00000430517 648 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC092013.1-201ENST00000438795 332 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 RAB11AP1-201ENST00000442978 646 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 RPL21P133-201ENST00000443666 476 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 NOP56P2-201ENST00000447491 769 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 RN7SL189P-201ENST00000468631 289 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms