Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC105185.1-201ENST00000518705 535 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 HIGD1AP18-201ENST00000520730 278 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC022880.1-201ENST00000534017 973 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 MIR4270-201ENST00000581799 70 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC116447.1-201ENST00000613153 453 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC019206.1-201ENST00000621938 425 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 MTND5P29-201ENST00000458676 1807 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC104260.2-201ENST00000623551 3497 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC099654.2-201ENST00000433031 1980 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 RN7SKP145-201ENST00000363291 303 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 SNORA70.10-201ENST00000384515 134 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 RNA5SP241-201ENST00000391326 114 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 MTCO3P21-201ENST00000430791 643 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC009238.2-201ENST00000431026 355 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 MTCYBP39-201ENST00000437562 491 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC092013.1-201ENST00000438795 332 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 CEACAMP9-201ENST00000442990 513 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 PTMAP3-201ENST00000447474 330 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC104689.1-201ENST00000473356 768 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 UBA52P3-201ENST00000491303 382 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 RN7SL591P-201ENST00000496150 292 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC108120.2-201ENST00000512973 294 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC010546.1-201ENST00000569391 485 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 MIR3915-201ENST00000578518 97 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 MIR3667-201ENST00000581025 74 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 NTAN1P1-201ENST00000603150 646 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC011374.2-201ENST00000607135 526 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AL161616.1-201ENST00000611867 286 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AL158063.1-201ENST00000615349 536 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC131238.1-201ENST00000617135 328 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 FRG1HP-204ENST00000617940 757 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 FP325313.1-201ENST00000638228 703 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 AL034549.2-201ENST00000618285 3373 ntBASIC5.81□□□□□ -1.48
CTDP1Q9Y5B0 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 CR381670.1-201ENST00000624291 1693 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 OR5H15-201ENST00000383696 930 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 CYB5AP4-201ENST00000396692 399 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 AL035079.1-201ENST00000405210 287 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.8□□□□□ -1.48
CTDP1Q9Y5B0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms