Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 RPL7P47-201ENST00000497299 556 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC025554.1-201ENST00000505641 188 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC006499.3-201ENST00000506077 748 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC010468.3-201ENST00000508225 458 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 NARSP2-201ENST00000518524 679 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 HMGB1P23-201ENST00000518743 568 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC008802.1-201ENST00000519121 791 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC010306.1-201ENST00000523223 1117 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC021006.3-201ENST00000530771 192 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC027104.1-201ENST00000563702 681 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC125494.3-201ENST00000602759 455 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC083899.3-201ENST00000603413 594 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AP003392.5-201ENST00000607857 415 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC103710.3-201ENST00000608157 948 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC107308.1-201ENST00000615897 301 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AC099669.2-201ENST00000616549 437 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 MIR6864-201ENST00000617935 70 ntBASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
KCNIP3Q9Y2W7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 RNA5SP123-201ENST00000363244 119 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 U8.4-201ENST00000363626 134 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 RNU1-106P-201ENST00000384382 164 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 MIR1179-201ENST00000408703 91 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 MIR1282-201ENST00000408865 101 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC114814.2-201ENST00000419195 485 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC073310.1-201ENST00000423226 1033 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AP001324.1-201ENST00000428553 399 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 NPM1P34-201ENST00000428821 893 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AF228730.2-201ENST00000438784 848 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 ELOCP3-201ENST00000439303 348 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 CEACAMP7-201ENST00000444105 496 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 RNU7-170P-201ENST00000459303 61 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 BX284632.1-201ENST00000478218 541 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC104109.1-201ENST00000498563 436 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 RPL7L1P4-201ENST00000513004 707 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC083923.1-201ENST00000523708 376 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 OR5D15P-201ENST00000531671 942 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC006064.5-201ENST00000541782 248 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 MIR3667-201ENST00000581025 74 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 ZNF92P2-201ENST00000600543 1059 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC005191.1-201ENST00000603950 358 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 Z82195.1-201ENST00000604558 398 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AL049634.3-201ENST00000604968 457 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC113194.1-201ENST00000606037 500 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 AC128687.2-201ENST00000609657 566 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 RN7SL722P-201ENST00000617780 284 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 FRG1HP-204ENST00000617940 757 ntBASIC3.55□□□□□ -1.84
KCNIP3Q9Y2W7 RN7SL565P-201ENST00000618246 284 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms