Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 IMMP1LP1-201ENST00000605170 488 ntBASIC4.39□□□□□ -1.71
SATB2Q9UPW6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 AL451142.2-201ENST00000429076 2090 ntBASIC4.39□□□□□ -1.71
SATB2Q9UPW6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SATB2Q9UPW6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 MTCO1P4-201ENST00000520516 1409 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AL592494.2-201ENST00000425455 1548 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 MIR16-2-201ENST00000362117 81 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 SNORA63.3-201ENST00000362682 132 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 RNU6-304P-201ENST00000364855 107 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 RNU6-452P-201ENST00000384406 107 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 MIR921-201ENST00000401133 56 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 RNU6-603P-201ENST00000411403 107 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC105402.1-201ENST00000413336 545 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AL158825.1-201ENST00000414735 521 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 RPS12P10-201ENST00000427031 377 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 RPS3AP54-201ENST00000435535 734 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 TDGF1P1-201ENST00000445734 527 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 MOB1AP2-201ENST00000446060 614 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AL645939.1-201ENST00000453429 797 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AL133477.1-201ENST00000457472 514 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC105137.1-201ENST00000484355 562 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC092902.1-201ENST00000486999 259 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 RPL21P129-201ENST00000491732 478 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC092045.1-201ENST00000495716 1231 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 PSMB7P1-201ENST00000556349 514 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC018552.3-201ENST00000567416 561 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC022884.3-201ENST00000579571 248 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC093227.2-201ENST00000589357 285 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 MIR92B-201ENST00000607575 96 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC234782.5-201ENST00000617723 324 ntBASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SATB2Q9UPW6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 AC100871.1-201ENST00000507871 1456 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 AL672167.1-205ENST00000641112 3080 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 AC010329.2-201ENST00000595195 2737 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 RNU1-85P-201ENST00000364127 164 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 RNU6-1005P-201ENST00000384519 107 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 MIR23A-201ENST00000385245 73 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 RPL23AP26-201ENST00000412728 464 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 LINC01347-201ENST00000417964 355 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 MTCO3P4-201ENST00000419236 787 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 PNRC2P1-201ENST00000423940 420 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 FO393419.3-201ENST00000428741 282 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 FTH1P6-201ENST00000430768 320 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 PHBP16-201ENST00000446318 950 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 AL359073.1-201ENST00000448036 403 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 RPL7P48-201ENST00000461513 746 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SATB2Q9UPW6 AC091167.1-201ENST00000492017 396 ntBASIC4.37□□□□□ -1.71
SATB2Q9UPW6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms