Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 VTA1P1-201ENST00000414044 866 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 EIF2S2P3-201ENST00000428356 999 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AC073069.1-201ENST00000428657 441 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 TMX2P1-201ENST00000436507 708 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 RPL7P29-201ENST00000437151 728 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 ARL4AP1-201ENST00000503220 705 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 RN7SKP21-201ENST00000516503 220 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 OR5AK3P-201ENST00000527486 1297 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 CYP4A43P-201ENST00000568156 121 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 MIR5684-201ENST00000585074 65 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AC092474.3-201ENST00000603022 568 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AC114878.2-201ENST00000604863 1251 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 MIR6798-201ENST00000612887 67 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AL731566.2-201ENST00000618971 317 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 RNA5SP196-201ENST00000625967 102 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AC083865.1-201ENST00000636634 831 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AC104118.1-201ENST00000607625 1589 ntBASIC4.17□□□□□ -1.74
LHX3Q9UBR4 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LHX3Q9UBR4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AL512283.1-201ENST00000606756 1384 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 RPL31P52-201ENST00000407532 367 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC108032.1-201ENST00000416706 207 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AL358176.3-201ENST00000420757 454 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 PNRC2P1-201ENST00000423940 420 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 DYNLL1P7-201ENST00000429273 258 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AL358472.1-201ENST00000431295 329 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 RNFT1P2-201ENST00000443064 757 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 RPL7P1-201ENST00000468161 747 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 RPL7P9-201ENST00000468715 747 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 UBA52P3-201ENST00000491303 382 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 HPRT1P2-201ENST00000505250 544 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 STMN1P2-201ENST00000508435 439 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC027338.1-201ENST00000514840 825 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 VTA1P2-201ENST00000520205 911 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 RPL23AP87-202ENST00000573039 466 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC115085.1-201ENST00000588924 229 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC016717.3-201ENST00000624730 554 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AC068724.3-201ENST00000625906 87 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LHX3Q9UBR4 AL353743.4-201ENST00000422653 1547 ntBASIC4.16□□□□□ -1.74
LHX3Q9UBR4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LHX3Q9UBR4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
LHX3Q9UBR4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LHX3Q9UBR4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LHX3Q9UBR4 USP9YP4-201ENST00000424401 1745 ntBASIC4.15□□□□□ -1.74
LHX3Q9UBR4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LHX3Q9UBR4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LHX3Q9UBR4 RNU6-792P-201ENST00000363490 107 ntBASIC4.15□□□□□ -1.75
LHX3Q9UBR4 SNORA37-201ENST00000384504 129 ntBASIC4.15□□□□□ -1.75
LHX3Q9UBR4 RPL21P65-201ENST00000406094 466 ntBASIC4.15□□□□□ -1.75
LHX3Q9UBR4 HSPE1P12-201ENST00000412576 301 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms