Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AL450326.2-201ENST00000421913 1962 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 SNORA60-201ENST00000362396 134 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 RNU6-185P-201ENST00000384421 107 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 SNORA11-201ENST00000408789 128 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 RNU4-74P-201ENST00000411280 161 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 HSPE1P12-201ENST00000412576 301 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 RPS26P47-201ENST00000427219 348 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 RPL23AP89-201ENST00000439324 255 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 PTMAP3-201ENST00000447474 330 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 RAD23BP3-201ENST00000454157 1152 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AC089999.1-201ENST00000460336 374 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AC079804.1-201ENST00000461922 436 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 VWA8P1-201ENST00000510889 176 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 MIR4286-201ENST00000580651 93 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 CBX3P2-202ENST00000583365 535 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AC022916.3-201ENST00000592961 742 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 PSMA6P4-201ENST00000603247 718 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 OR4H6P-202ENST00000603819 340 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AC116447.1-201ENST00000613153 453 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AP004607.9-201ENST00000618202 316 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 MIR7702-201ENST00000621931 59 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 AC091948.2-201ENST00000636510 279 ntBASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCF1Q9UBD9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 AL445437.1-201ENST00000623157 3087 ntBASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 AC093311.1-201ENST00000506586 2021 ntBASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 AC012020.1-201ENST00000624541 1728 ntBASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 AC017104.4-201ENST00000636283 1592 ntBASIC3.65□□□□□ -1.82
CLCF1Q9UBD9 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 Z82217.1-201ENST00000625157 8149 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 MIR448-201ENST00000362131 111 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 RNA5SP388-201ENST00000362584 119 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 RNU1-64P-201ENST00000365443 163 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL356057.1-202ENST00000402263 756 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 VN1R8P-201ENST00000407739 893 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL160275.2-201ENST00000412010 394 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 EIF4EP1-201ENST00000422311 642 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL158073.1-201ENST00000426848 1104 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 MTCO1P52-201ENST00000433928 531 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC007000.2-201ENST00000442564 487 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 MTCYBP21-201ENST00000443300 1113 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC133473.1-201ENST00000455173 299 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 CCDC75P1-201ENST00000469247 791 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 SYT14P1-201ENST00000481459 721 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 VN1R105P-201ENST00000486595 910 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC005912.1-201ENST00000495392 255 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 RNU6-347P-201ENST00000516658 105 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC087272.1-201ENST00000523624 533 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 LINC00557-201ENST00000563184 1279 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 RN7SL703P-201ENST00000578485 302 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC053481.4-201ENST00000583164 216 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms