Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC092017.2-201ENST00000427600 362 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 RRM2P4-201ENST00000441721 562 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 RN7SL93P-201ENST00000463035 293 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 UBE2CP3-201ENST00000502715 450 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC023813.4-201ENST00000607580 580 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AP000553.6-201ENST00000641242 118 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CISHQ9NSE2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 CASC19-284ENST00000642142 1868 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 RNU1-18P-201ENST00000363062 164 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 SNORD3H-201ENST00000384486 214 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 RNU6-178P-201ENST00000384631 104 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC007066.1-201ENST00000392902 381 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 RN7SKP202-201ENST00000410439 330 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 RPL36AP36-201ENST00000418616 301 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 KCTD10P1-201ENST00000434203 625 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 HMGB3P10-201ENST00000434734 572 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC099563.1-201ENST00000456086 418 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC113430.1-201ENST00000506872 718 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 AL020997.2-201ENST00000602607 184 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 AL109618.2-201ENST00000605527 211 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 HMGB1P50-201ENST00000605814 607 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 AL121772.2-201ENST00000614331 297 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 LINC00901.1-201ENST00000617252 152 ntBASIC3.93□□□□□ -1.78
CISHQ9NSE2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CISHQ9NSE2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.93□□□□□ -1.78
CISHQ9NSE2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 MFSD8-236ENST00000641509 4050 ntBASIC3.92□□□□□ -1.78
CISHQ9NSE2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 AC019155.1-201ENST00000382242 574 ntBASIC3.92□□□□□ -1.78
CISHQ9NSE2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 AC096644.3-201ENST00000416788 338 ntBASIC3.92□□□□□ -1.78
CISHQ9NSE2 RPL17P36-201ENST00000420302 549 ntBASIC3.92□□□□□ -1.78
CISHQ9NSE2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 AL672167.3-201ENST00000465951 960 ntBASIC3.92□□□□□ -1.78
CISHQ9NSE2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 RN7SKP83-201ENST00000516512 178 ntBASIC3.92□□□□□ -1.78
CISHQ9NSE2 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 TRAV15-201ENST00000556680 249 ntBASIC3.92□□□□□ -1.78
CISHQ9NSE2 AC006130.2-201ENST00000586202 326 ntBASIC3.92□□□□□ -1.78
CISHQ9NSE2 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.92□□□□□ -1.78
CISHQ9NSE2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CISHQ9NSE2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms