Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MFSD8-239ENST00000641590 2479 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSU72Q9NP77 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSU72Q9NP77 MRPL32P1-201ENST00000406301 247 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 RN7SKP205-201ENST00000410999 307 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 RAB28P1-201ENST00000411517 641 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 MTCO2P12-201ENST00000427426 682 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC140076.1-201ENST00000449897 361 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 RNU7-136P-201ENST00000458819 69 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 SNORD125-201ENST00000459538 96 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 RPL23AP12-201ENST00000467573 473 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 RN7SL655P-201ENST00000486087 298 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 RNU6-277P-201ENST00000516272 106 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC105029.1-201ENST00000520250 669 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 CHEK2P2-201ENST00000554701 672 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AL359999.1-201ENST00000604513 294 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC018690.1-201ENST00000608144 626 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 MIR6726-201ENST00000613751 61 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 MIR6849-201ENST00000618543 69 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 AC090527.3-201ENST00000619041 548 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSU72Q9NP77 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 NMD3P1-201ENST00000439704 1488 ntBASIC5.88□□□□□ -1.47
SSU72Q9NP77 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSU72Q9NP77 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.88□□□□□ -1.47
SSU72Q9NP77 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSU72Q9NP77 DDX18P4-201ENST00000511690 1966 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC107021.2-201ENST00000567714 2095 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSU72Q9NP77 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AL161912.4-201ENST00000623889 2468 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC068050.1-201ENST00000394891 380 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 RPL35AP31-201ENST00000418340 337 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC073069.1-201ENST00000428657 441 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 USP9YP15-201ENST00000442391 422 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 ARPC3P5-201ENST00000448802 534 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC009244.1-201ENST00000450566 258 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC096741.1-201ENST00000472250 846 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 RNU6-1045P-201ENST00000516321 107 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 COX6B1P6-201ENST00000522347 255 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC022690.1-201ENST00000526681 550 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AP004609.2-201ENST00000532177 190 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC089984.3-201ENST00000552838 363 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC034105.3-201ENST00000565294 442 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC055876.1-202ENST00000567053 138 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AL355375.2-201ENST00000574825 175 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC004839.1-201ENST00000610269 501 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.87□□□□□ -1.47
SSU72Q9NP77 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC138649.5-201ENST00000637456 137 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 OR11H5P-202ENST00000641612 1325 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSU72Q9NP77 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC130360.2-201ENST00000533477 1556 ntBASIC5.87□□□□□ -1.47
SSU72Q9NP77 AC025574.1-201ENST00000554784 1653 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms