Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC119744.1-201ENST00000454746 1715 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC018688.1-201ENST00000636528 1754 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RNU5E-1-201ENST00000362477 120 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 U3.12-201ENST00000364498 214 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 Y_RNA.463-201ENST00000384271 102 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 UBBP1-201ENST00000392399 473 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RPS3AP2-201ENST00000407190 754 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RN7SKP266-201ENST00000410232 287 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RN7SKP222-201ENST00000410651 315 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RNU6-193P-201ENST00000410977 107 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RNU6-954P-201ENST00000411355 107 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 CXCR2P1-202ENST00000443392 1074 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AL356010.1-201ENST00000456364 102 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RNU7-66P-201ENST00000459469 62 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC093267.1-201ENST00000489176 961 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 MTCO3P44-201ENST00000510977 541 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC022080.3-201ENST00000544433 482 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC069061.3-201ENST00000582254 823 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 MIR3133-201ENST00000583157 78 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC007255.2-201ENST00000604053 631 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AL157899.1-201ENST00000604110 936 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 CR382285.1-202ENST00000604687 547 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RPSAP75-201ENST00000605848 301 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC092266.1-201ENST00000610958 165 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC098657.3-201ENST00000620434 263 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 AL354702.2-202ENST00000641481 890 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 WDR95P-201ENST00000425638 1542 ntBASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTNAP3Q9BZ76 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC138915.4-201ENST00000565549 4147 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC025125.1-201ENST00000624743 1922 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AC104162.1-201ENST00000430831 2382 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RPL32P3-201ENST00000359025 275 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RNU6-1097P-201ENST00000363586 107 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RNU6-777P-201ENST00000364265 104 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RNU6-522P-201ENST00000364497 107 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 Y_RNA.414-201ENST00000384011 101 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 RNU6-310P-201ENST00000384655 107 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 MIR143-201ENST00000385300 106 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 AL139397.2-201ENST00000404529 772 ntBASIC6.44□□□□□ -1.38
CNTNAP3Q9BZ76 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms