Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MIR433-201ENST00000384837 93 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AL031985.1-201ENST00000392713 418 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 RPS7P8-201ENST00000418311 581 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 RPS3P2-201ENST00000421346 701 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC245884.2-201ENST00000426257 404 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 MTND3P21-201ENST00000433774 331 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 LYPLA1P1-201ENST00000434514 622 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 MTCYBP45-201ENST00000435243 565 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC108734.1-201ENST00000439549 399 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 GAPDHP17-201ENST00000449858 1001 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 RPL37P6-202ENST00000464216 403 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 RN7SL188P-201ENST00000469842 285 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 SNRPCP3-201ENST00000474888 476 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 OR5H5P-201ENST00000503164 928 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC022483.1-201ENST00000514020 567 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 Y_RNA.672-201ENST00000516289 104 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 RNU6-314P-201ENST00000516574 104 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 DUXAP4-201ENST00000603046 613 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC112230.1-201ENST00000604342 547 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC126118.1-201ENST00000607744 628 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AC024941.1-201ENST00000612250 334 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AL138960.1-201ENST00000613838 513 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AP000843.1-201ENST00000624880 701 ntBASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
TRAIPQ9BWF2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AL592429.1-201ENST00000403909 1473 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AL049555.1-201ENST00000562834 1933 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AL161756.3-201ENST00000641216 2071 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 RNU1-150P-201ENST00000362491 162 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 SNORA70E-201ENST00000384492 135 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 OR8V1P-201ENST00000395193 873 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 RN7SKP206-201ENST00000410823 293 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 MTND6P12-201ENST00000428247 522 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC006335.2-201ENST00000437993 330 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 Z95327.1-201ENST00000446082 482 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 GEMIN2P1-201ENST00000454246 752 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 NXT1P1-201ENST00000458481 316 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC011476.1-201ENST00000466725 307 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC007998.1-201ENST00000474156 672 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 RPL23AP41-201ENST00000484754 458 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 PPIAP19-201ENST00000486414 492 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 RPL23AP72-201ENST00000492447 435 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 MTCO3P44-201ENST00000510977 541 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC012146.2-201ENST00000576545 416 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 NPIPB1P-202ENST00000588786 828 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC119501.1-201ENST00000603646 475 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AL161729.4-201ENST00000604650 476 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AP000860.1-201ENST00000605250 559 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC141002.1-201ENST00000607025 279 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 AC138965.3-201ENST00000623875 498 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 OR5H6-203ENST00000642105 978 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms