Protein–RNA interactions for Protein: Q9BVL2

NUP58, Nucleoporin p58/p45, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58Q9BVL2 AC015911.5-201ENST00000587076 451 ntBASIC4.42□□□□□ -1.7
NUP58Q9BVL2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.42□□□□□ -1.7
NUP58Q9BVL2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NUP58Q9BVL2 AC005021.1-201ENST00000608730 355 ntBASIC4.42□□□□□ -1.7
NUP58Q9BVL2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP58Q9BVL2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NUP58Q9BVL2 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUP58Q9BVL2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.42□□□□□ -1.7
NUP58Q9BVL2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 SNORA60-201ENST00000362396 134 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 SNORD35B-201ENST00000363660 87 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 RNU1-89P-201ENST00000384592 164 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 CDC27P1-201ENST00000445384 715 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 HSFY6P-201ENST00000445573 403 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 TVP23BP1-201ENST00000557500 617 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AC084757.1-201ENST00000559987 490 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 HMGB3P26-201ENST00000560051 582 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AL161729.3-201ENST00000603533 673 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 MIR486-1-201ENST00000612171 68 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 MIR8059-201ENST00000620427 81 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AC090506.2-201ENST00000624521 419 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 RNA5SP196-201ENST00000625967 102 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.41□□□□□ -1.7
NUP58Q9BVL2 UBE3AP2-201ENST00000429033 2259 ntBASIC4.41□□□□□ -1.7
NUP58Q9BVL2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.4□□□□□ -1.7
NUP58Q9BVL2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.4□□□□□ -1.7
NUP58Q9BVL2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUP58Q9BVL2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NUP58Q9BVL2 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 RNA5SP322-201ENST00000363617 119 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 RNA5SP317-201ENST00000410176 116 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 RNA5SP311-201ENST00000411290 116 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC073464.3-201ENST00000422564 712 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 SEC63P1-201ENST00000425785 1258 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 Z85994.2-201ENST00000434327 452 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 HMGB1P16-201ENST00000447155 540 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 FABP3P2-201ENST00000453169 399 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC005229.2-201ENST00000456995 399 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC092691.2-201ENST00000461787 803 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC026726.1-201ENST00000512859 601 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 RNA5SP315-201ENST00000516340 116 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 RNA5SP312-201ENST00000517068 116 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC067904.2-201ENST00000517322 1283 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 OR7E10P-201ENST00000526420 991 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC141257.3-201ENST00000572906 215 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC025627.2-201ENST00000576220 160 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AL591034.3-201ENST00000605511 685 ntBASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUP58Q9BVL2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP58Q9BVL2 AL049555.1-201ENST00000562834 1933 ntBASIC4.39□□□□□ -1.71
NUP58Q9BVL2 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NUP58Q9BVL2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.39□□□□□ -1.71
NUP58Q9BVL2 COX6B1P7-201ENST00000430845 235 ntBASIC4.39□□□□□ -1.71
NUP58Q9BVL2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP58Q9BVL2 OR4C10P-201ENST00000434991 931 ntBASIC4.39□□□□□ -1.71
NUP58Q9BVL2 RPL7P28-201ENST00000437739 740 ntBASIC4.39□□□□□ -1.71
NUP58Q9BVL2 AC122718.1-201ENST00000439448 744 ntBASIC4.39□□□□□ -1.71
NUP58Q9BVL2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP58Q9BVL2 FAM133DP-201ENST00000464802 691 ntBASIC4.39□□□□□ -1.71
NUP58Q9BVL2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.39□□□□□ -1.71
NUP58Q9BVL2 NDUFB4P12-201ENST00000513465 390 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms