Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.63□□□□□ -1.83
VGLL1Q99990 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
VGLL1Q99990 OR11J2P-201ENST00000555298 907 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.63□□□□□ -1.83
VGLL1Q99990 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.63□□□□□ -1.83
VGLL1Q99990 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.63□□□□□ -1.83
VGLL1Q99990 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.63□□□□□ -1.83
VGLL1Q99990 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.63□□□□□ -1.83
VGLL1Q99990 AC011453.2-201ENST00000603737 729 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 BNIP3P4-201ENST00000604946 565 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.63□□□□□ -1.83
VGLL1Q99990 AP000238.1-201ENST00000608759 426 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 AC072039.2-201ENST00000608883 439 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 VIS1.1-201ENST00000610517 203 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 AC011939.3-201ENST00000613686 466 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.63□□□□□ -1.83
VGLL1Q99990 AC234782.5-201ENST00000617723 324 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 AC092140.2-201ENST00000618027 521 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.63□□□□□ -1.83
VGLL1Q99990 OR8B1P-202ENST00000641132 1178 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
VGLL1Q99990 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VGLL1Q99990 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.63□□□□□ -1.83
VGLL1Q99990 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VGLL1Q99990 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
VGLL1Q99990 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VGLL1Q99990 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AL049737.1-201ENST00000413920 1403 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.62□□□□□ -1.83
VGLL1Q99990 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 SNURFL-201ENST00000309296 343 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 NACA3P-201ENST00000359690 648 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 RNU1-108P-201ENST00000362556 161 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 RNU4-4P-201ENST00000364588 130 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 RNA5SP455-201ENST00000365190 119 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.62□□□□□ -1.83
VGLL1Q99990 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VGLL1Q99990 MIR320B1-201ENST00000390209 79 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AL391361.1-201ENST00000405580 489 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 RNA5SP345-201ENST00000410646 108 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AC092745.2-202ENST00000411880 369 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 CEACAMP8-201ENST00000413902 580 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 GAPDHP49-201ENST00000421421 961 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AL593851.1-201ENST00000426171 157 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 MTND1P20-201ENST00000430341 950 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 CDY14P-201ENST00000431260 1014 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AL451139.1-201ENST00000434718 346 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 GTF2IP7-202ENST00000436677 309 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 RPL7P29-201ENST00000437151 728 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AC002542.1-201ENST00000440683 193 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AC009263.1-201ENST00000441193 1239 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AL137845.2-201ENST00000444292 988 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.62□□□□□ -1.83
VGLL1Q99990 CDY23P-201ENST00000451661 1014 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 MRPL42P4-201ENST00000453267 443 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AL389915.2-201ENST00000454576 441 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 ANKRD26P4-201ENST00000455755 950 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AL133477.1-201ENST00000457472 514 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.62□□□□□ -1.83
VGLL1Q99990 RN7SL172P-201ENST00000460535 303 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.62□□□□□ -1.83
VGLL1Q99990 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.62□□□□□ -1.83
VGLL1Q99990 RPS3AP43-201ENST00000479743 781 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 RPS6P4-201ENST00000494693 758 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 RPS4XP18-201ENST00000495480 763 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC104090.1-201ENST00000506341 1171 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 NDUFB4P12-201ENST00000513465 390 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 DUXAP1-201ENST00000556632 463 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC079075.1-201ENST00000559543 878 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.62□□□□□ -1.83
VGLL1Q99990 AC093249.4-201ENST00000564755 259 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 MIR5708-201ENST00000579723 85 ntBASIC3.62□□□□□ -1.83
VGLL1Q99990 MIR3176-201ENST00000582210 90 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms