Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL445493.3-201ENST00000619568 477 ntBASIC5.59□□□□□ -1.51
SIN3AQ96ST3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.59□□□□□ -1.51
SIN3AQ96ST3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC009501.3-201ENST00000605001 1352 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 SNORD115-48-201ENST00000364764 76 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 U8.11-201ENST00000384699 133 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 U8.12-201ENST00000384701 133 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 RPL7P60-201ENST00000397636 735 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC087650.1-201ENST00000431445 468 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 ZNF965P-201ENST00000432501 817 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AL157884.3-201ENST00000448273 1184 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 U8.18-201ENST00000459285 133 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 CABYRP1-201ENST00000465493 1045 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC108729.2-201ENST00000476543 840 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC106785.3-201ENST00000564064 847 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC087499.8-201ENST00000578406 226 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 AC244505.7-201ENST00000599675 272 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 RMST_5.1-201ENST00000618704 126 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 DDX18P6-201ENST00000450119 1997 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIN3AQ96ST3 MFSD8-236ENST00000641509 4050 ntBASIC5.58□□□□□ -1.52
SIN3AQ96ST3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC000123.3-201ENST00000624029 4975 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 MIR448-201ENST00000362131 111 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 RNU6-1251P-201ENST00000364502 107 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AL356967.1-201ENST00000406305 431 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 JKAMPP1-201ENST00000413804 919 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC004552.1-201ENST00000419089 348 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 MORF4L1P7-201ENST00000426038 703 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AL606490.7-201ENST00000433136 191 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC007563.3-201ENST00000433233 371 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC007000.2-201ENST00000442564 487 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 RPS26P3-201ENST00000470205 348 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC084198.1-201ENST00000477747 402 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC090543.2-201ENST00000483963 348 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC004057.1-201ENST00000485827 348 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 AC093535.2-201ENST00000624769 2326 ntBASIC5.57□□□□□ -1.52
SIN3AQ96ST3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SIN3AQ96ST3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 TCEA1P4-201ENST00000415066 844 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 MTND2P21-201ENST00000436242 1042 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AC104629.2-201ENST00000468627 598 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 AC093663.2-201ENST00000484625 313 ntBASIC5.56□□□□□ -1.52
SIN3AQ96ST3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.56□□□□□ -1.52
SIN3AQ96ST3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms