Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 AL139413.1-201ENST00000421309 217 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 HMGB1P37-201ENST00000439613 609 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 GEMIN8P3-201ENST00000445417 720 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 SLC31A1P1-201ENST00000451221 567 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 HMGB1P5-202ENST00000451497 985 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 RPL5P12-201ENST00000477071 851 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 MIR8069-1-201ENST00000616627 86 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 MIR8069-2-201ENST00000621412 86 ntBASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC3.05□□□□□ -1.92
CSMD1Q96PZ7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 SNORA54-201ENST00000384281 123 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AL512310.1-201ENST00000548639 172 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AL121594.4-201ENST00000556211 1196 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AC107993.1-201ENST00000591343 684 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AC004656.1-201ENST00000568479 4951 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 LINC01355-201ENST00000566551 5444 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 BTF3P9-201ENST00000418784 283 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AL645931.1-201ENST00000439737 410 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AL136097.1-201ENST00000456945 913 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 MORF4L2P1-201ENST00000503761 858 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AL137790.1-201ENST00000634283 177 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AC020656.2-201ENST00000613291 5309 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 RPF2P1-201ENST00000424137 906 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 RPL23AP25-201ENST00000430973 463 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 OR5M7P-201ENST00000526140 972 ntBASIC3.04□□□□□ -1.92
CSMD1Q96PZ7 AP002512.4-202ENST00000641599 4530 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AL024507.1-201ENST00000412741 274 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 BMS1P22-201ENST00000414726 313 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AC097262.1-201ENST00000452559 548 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 RPS20P32-201ENST00000456044 356 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AP000916.1-201ENST00000533869 835 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 MIR7843-201ENST00000622274 79 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AC010149.2-201ENST00000637608 315 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 HSPD1P11-201ENST00000508643 1702 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AC010740.1-201ENST00000417035 684 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 PRELID3BP10-201ENST00000431957 584 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 RPS3AP43-201ENST00000479743 781 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 AL732618.1-201ENST00000623251 301 ntBASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms