Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNU6-358P-201ENST00000516564 75 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 IGHV3-63-201ENST00000518422 341 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 OR5M7P-201ENST00000526140 972 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 CENPUP1-201ENST00000526649 1202 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AL121594.2-201ENST00000541658 472 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 PART1_1.1-201ENST00000611761 217 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC005332.6-201ENST00000613178 446 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC092650.2-201ENST00000619984 902 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AP004607.3-201ENST00000530354 3915 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AC005261.2-201ENST00000593427 4258 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AL031985.3-201ENST00000565390 2449 ntBASIC6.42□□□□□ -1.38
SYNGAP1Q96PV0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC022893.2-201ENST00000564832 3296 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RNU6-666P-201ENST00000363499 107 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 MIR130A-201ENST00000385274 89 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RNU6-780P-201ENST00000391030 104 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 MIR1303-201ENST00000408625 86 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL450992.3-201ENST00000413192 568 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC069157.1-201ENST00000421749 137 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL009174.1-201ENST00000426577 416 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL590399.2-201ENST00000427536 309 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL512649.1-201ENST00000428997 581 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 Z80107.2-201ENST00000445127 392 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RPL39P6-201ENST00000448289 150 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RPS20P24-201ENST00000457473 361 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RPS23P2-201ENST00000463671 415 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC010307.1-201ENST00000467206 836 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RN7SL808P-201ENST00000496066 299 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RNF138P1-201ENST00000502765 546 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC009646.1-201ENST00000510455 318 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 Y_RNA.675-201ENST00000516389 149 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC087276.1-201ENST00000529659 480 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 DPPA3P2-202ENST00000557188 1219 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC018552.1-201ENST00000562099 811 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 MIR4330-201ENST00000579077 105 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC091488.1-201ENST00000604239 660 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL161729.4-201ENST00000604650 476 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL022394.1-201ENST00000606979 292 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC093388.1-201ENST00000609166 430 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC103710.1-201ENST00000610003 901 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL020991.1-201ENST00000612314 373 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AP000648.2-201ENST00000624182 404 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AC107982.1-201ENST00000507171 1300 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 AP002512.4-202ENST00000641599 4530 ntBASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNGAP1Q96PV0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.4□□□□□ -1.38
SYNGAP1Q96PV0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SYNGAP1Q96PV0 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SYNGAP1Q96PV0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
SYNGAP1Q96PV0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
SYNGAP1Q96PV0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SYNGAP1Q96PV0 AC006026.1-201ENST00000444025 1803 ntBASIC6.4□□□□□ -1.38
SYNGAP1Q96PV0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SYNGAP1Q96PV0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms