Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.23□□□□□ -1.57
USP47Q96K76 SOD1P3-201ENST00000518682 454 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 IGKV2D-19-201ENST00000523346 262 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.23□□□□□ -1.57
USP47Q96K76 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.23□□□□□ -1.57
USP47Q96K76 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.23□□□□□ -1.57
USP47Q96K76 AC020633.1-201ENST00000468439 2247 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 LINC00561-201ENST00000565815 2738 ntBASIC5.23□□□□□ -1.57
USP47Q96K76 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP47Q96K76 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
USP47Q96K76 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.23□□□□□ -1.57
USP47Q96K76 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP47Q96K76 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
USP47Q96K76 RNA5SP51-201ENST00000364750 119 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 MTND2P11-201ENST00000423638 648 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 HIGD1AP12-201ENST00000427832 281 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 NPM1P48-201ENST00000436002 853 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 AC017007.3-201ENST00000479865 435 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 UBA52P3-201ENST00000491303 382 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 RN7SKP5-201ENST00000517045 272 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 SNORA70.24-201ENST00000517233 118 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP47Q96K76 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.22□□□□□ -1.57
USP47Q96K76 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.22□□□□□ -1.57
USP47Q96K76 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.22□□□□□ -1.57
USP47Q96K76 EIF1P6-201ENST00000600054 334 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP47Q96K76 AC015849.6-201ENST00000605454 474 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 AL391497.1-201ENST00000608671 547 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 MIR486-1-201ENST00000612171 68 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 AC007342.8-201ENST00000623278 678 ntBASIC5.22□□□□□ -1.57
USP47Q96K76 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP47Q96K76 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
USP47Q96K76 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.22□□□□□ -1.57
USP47Q96K76 CASC19-284ENST00000642142 1868 ntBASIC5.21□□□□□ -1.57
USP47Q96K76 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
USP47Q96K76 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP47Q96K76 ATP5A1P2-201ENST00000412323 255 ntBASIC5.21□□□□□ -1.58
USP47Q96K76 CBX1P3-201ENST00000413296 527 ntBASIC5.21□□□□□ -1.58
USP47Q96K76 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.21□□□□□ -1.58
USP47Q96K76 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.21□□□□□ -1.58
USP47Q96K76 AL645931.1-201ENST00000439737 410 ntBASIC5.21□□□□□ -1.58
USP47Q96K76 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP47Q96K76 AC006480.1-201ENST00000449887 378 ntBASIC5.21□□□□□ -1.58
USP47Q96K76 AC006511.1-201ENST00000470614 315 ntBASIC5.21□□□□□ -1.58
USP47Q96K76 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.21□□□□□ -1.58
USP47Q96K76 SUMO2P4-201ENST00000504193 276 ntBASIC5.21□□□□□ -1.58
USP47Q96K76 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP47Q96K76 AL133457.1-201ENST00000564251 987 ntBASIC5.21□□□□□ -1.58
USP47Q96K76 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.21□□□□□ -1.58
USP47Q96K76 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.21□□□□□ -1.58
USP47Q96K76 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.21□□□□□ -1.58
USP47Q96K76 AC119674.1-207ENST00000641355 633 ntBASIC5.21□□□□□ -1.58
USP47Q96K76 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP47Q96K76 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP47Q96K76 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.21□□□□□ -1.58
USP47Q96K76 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
USP47Q96K76 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
USP47Q96K76 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.21□□□□□ -1.58
USP47Q96K76 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP47Q96K76 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP47Q96K76 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP47Q96K76 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP47Q96K76 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP47Q96K76 PTMAP5-201ENST00000393073 333 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 ATP5F1P4-201ENST00000397288 746 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.2□□□□□ -1.58
USP47Q96K76 SYF2P2-201ENST00000417620 583 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 AL691447.1-201ENST00000419456 387 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 RPL21P109-201ENST00000422213 475 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP47Q96K76 IFNNP1-201ENST00000429219 553 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
USP47Q96K76 AC104978.1-201ENST00000449387 391 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.2□□□□□ -1.58
USP47Q96K76 PLGLA-201ENST00000465668 449 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.2□□□□□ -1.58
USP47Q96K76 AC004069.2-201ENST00000505438 1114 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.2□□□□□ -1.58
USP47Q96K76 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.2□□□□□ -1.58
USP47Q96K76 AC093014.1-201ENST00000548926 724 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
USP47Q96K76 MIR4727-201ENST00000622232 55 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 AC073346.2-201ENST00000624724 2058 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.2□□□□□ -1.58
USP47Q96K76 MFSD8-236ENST00000641509 4050 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.2□□□□□ -1.58
USP47Q96K76 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
USP47Q96K76 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP47Q96K76 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP47Q96K76 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP47Q96K76 AC093849.1-201ENST00000563631 2209 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP47Q96K76 AC087190.4-201ENST00000574616 8334 ntBASIC5.2□□□□□ -1.58
USP47Q96K76 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.19□□□□□ -1.58
USP47Q96K76 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
USP47Q96K76 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP47Q96K76 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.19□□□□□ -1.58
USP47Q96K76 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP47Q96K76 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms