Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 MTCO3P21-201ENST00000430791 643 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 RPS29P10-201ENST00000439197 166 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC093155.1-201ENST00000440164 826 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 MTND3P1-201ENST00000441336 220 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 BTF3P6-201ENST00000448054 499 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 DNAJB5P1-201ENST00000454004 806 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 CYCSP34-201ENST00000458172 304 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 RPS3AP43-201ENST00000479743 781 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC113430.1-201ENST00000506872 718 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 MTCO1P49-201ENST00000523429 802 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AP000619.3-201ENST00000535634 1127 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC090751.1-201ENST00000566966 267 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 RN7SL176P-201ENST00000580352 264 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 RN7SL708P-201ENST00000580952 299 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC011626.1-201ENST00000604710 562 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC090948.2-201ENST00000607363 564 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 MIR8069-1-201ENST00000616627 86 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC118658.2-201ENST00000618697 459 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC009704.2-201ENST00000618739 483 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 BX005214.3-202ENST00000619809 325 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 MIR8069-2-201ENST00000621412 86 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 AC010608.2-201ENST00000624830 470 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 MIR4278-201ENST00000636094 69 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 ZNF542P-204ENST00000482727 1305 ntBASIC4.95□□□□□ -1.62
VPS50Q96JG6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS50Q96JG6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS50Q96JG6 OR14L1P-202ENST00000641545 3009 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS50Q96JG6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC025263.3-201ENST00000622965 1396 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 RNU1-94P-201ENST00000362627 173 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 SNORA58B-201ENST00000364259 136 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS50Q96JG6 Z97832.1-201ENST00000402490 328 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AL161449.1-201ENST00000414531 1199 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC004690.1-201ENST00000418216 328 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC004074.1-201ENST00000421810 1063 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AL365203.2-201ENST00000423444 196 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC234781.2-201ENST00000426370 994 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 RPL21P110-201ENST00000433345 446 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 NOP56P2-201ENST00000447491 769 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AL445433.1-201ENST00000457507 257 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 RPF2P2-201ENST00000504693 896 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 NDUFB5P1-201ENST00000508134 564 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 BPTFP1-201ENST00000579209 492 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 BNIP3P26-201ENST00000600827 554 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC106791.2-201ENST00000604680 391 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AL451074.6-201ENST00000608512 729 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS50Q96JG6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS50Q96JG6 AL049737.1-201ENST00000413920 1403 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 AC073429.2-201ENST00000569694 1444 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 ECM1P2-201ENST00000503354 1577 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 THAP12P4-201ENST00000528321 2266 ntBASIC4.94□□□□□ -1.62
VPS50Q96JG6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
VPS50Q96JG6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms