Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.59□□□□□ -1.67
RTP4Q96DX8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.59□□□□□ -1.67
RTP4Q96DX8 AC093765.1-201ENST00000603758 881 ntBASIC4.59□□□□□ -1.67
RTP4Q96DX8 AC023509.5-201ENST00000617434 807 ntBASIC4.59□□□□□ -1.67
RTP4Q96DX8 AC123767.1-202ENST00000620407 817 ntBASIC4.59□□□□□ -1.67
RTP4Q96DX8 AC007546.2-201ENST00000623996 360 ntBASIC4.59□□□□□ -1.67
RTP4Q96DX8 AC139792.2-201ENST00000624218 587 ntBASIC4.59□□□□□ -1.67
RTP4Q96DX8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.59□□□□□ -1.67
RTP4Q96DX8 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.59□□□□□ -1.67
RTP4Q96DX8 AC139713.2-210ENST00000641741 992 ntBASIC4.59□□□□□ -1.67
RTP4Q96DX8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
RTP4Q96DX8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RTP4Q96DX8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
RTP4Q96DX8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RTP4Q96DX8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
RTP4Q96DX8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RTP4Q96DX8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.59□□□□□ -1.68
RTP4Q96DX8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RTP4Q96DX8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 RNU6-729P-201ENST00000384399 107 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 RNU4-74P-201ENST00000411280 161 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AL590806.1-201ENST00000415818 853 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 RPS3AP37-201ENST00000419176 745 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 RPL23AP93-201ENST00000440847 484 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 RPS23P7-201ENST00000466210 444 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 RPS26P28-201ENST00000470806 348 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 OR52A4P-201ENST00000472867 958 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC010486.3-201ENST00000511602 785 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AP000827.1-201ENST00000527814 258 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC009643.1-201ENST00000532030 391 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 MTCO2P15-201ENST00000532655 656 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AL109741.3-201ENST00000561748 592 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 DPRXP4-201ENST00000578053 568 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 MIR4715-201ENST00000584117 79 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC015726.1-201ENST00000602353 681 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AL135786.2-201ENST00000608422 615 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 AL121895.2-201ENST00000619558 447 ntBASIC4.58□□□□□ -1.68
RTP4Q96DX8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTP4Q96DX8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
RTP4Q96DX8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 ZNF849P-201ENST00000594711 1566 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AC017007.4-201ENST00000503353 1352 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 RNU6-636P-201ENST00000384598 107 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 VN1R8P-201ENST00000407739 893 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTP4Q96DX8 ZNF885P-201ENST00000420174 1098 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 AL513175.2-201ENST00000422071 443 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AP001324.1-201ENST00000428553 399 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 UBE2V1P1-201ENST00000430836 445 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AL157827.1-201ENST00000447622 132 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AC025459.1-201ENST00000504072 156 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 SNORA31.13-201ENST00000516624 135 ntBASIC4.57□□□□□ -1.68
RTP4Q96DX8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.57□□□□□ -1.68
RTP4Q96DX8 AC087373.1-201ENST00000524920 491 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms