Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC011037.1-201ENST00000483964 558 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC005912.1-201ENST00000495392 255 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 SNORD116-26-201ENST00000516006 96 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 SS18L2P2-201ENST00000583960 235 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 HMGB1P51-201ENST00000605166 638 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC024941.1-201ENST00000612250 334 ntBASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ECHDC3Q96DC8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 MIR448-201ENST00000362131 111 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 TRGV6-201ENST00000417928 299 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC092017.2-201ENST00000427600 362 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 RPL5P13-201ENST00000462840 709 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC110792.1-201ENST00000491826 472 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 RPS6P4-201ENST00000494693 758 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 RNA5SP154-201ENST00000516193 111 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 SNORA26.10-201ENST00000516427 141 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 NDUFA5P2-201ENST00000519723 344 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 TRAV11-201ENST00000539512 339 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC092868.3-201ENST00000560515 784 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 BNIP3P5-201ENST00000562290 498 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC053481.4-201ENST00000583164 216 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC007423.1-201ENST00000605009 627 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC012557.1-201ENST00000607115 611 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AL391597.1-201ENST00000618707 694 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC095038.2-201ENST00000621464 1070 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 MIR6500-201ENST00000622700 86 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AL773545.4-201ENST00000637262 310 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AC009452.1-201ENST00000640823 606 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AL513478.4-201ENST00000641636 310 ntBASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.01□□□□□ -1.77
ECHDC3Q96DC8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC097504.1-201ENST00000515103 2415 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 ACEA_U3.1-201ENST00000363057 217 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4□□□□□ -1.77
ECHDC3Q96DC8 RNU6-213P-201ENST00000384051 104 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 SNORA3C-201ENST00000408792 125 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 RNU6-628P-201ENST00000410675 107 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 BTF3P9-201ENST00000418784 283 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC009965.2-201ENST00000425328 970 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC104306.1-201ENST00000449702 371 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 AL672167.3-201ENST00000465951 960 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 VN1R105P-201ENST00000486595 910 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC010460.1-201ENST00000507087 466 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 UBTFL9-201ENST00000534504 1148 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 RN7SL703P-201ENST00000578485 302 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 MIR4458-201ENST00000578872 75 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC022916.3-201ENST00000592961 742 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 BNIP3P7-201ENST00000605641 516 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4□□□□□ -1.77
ECHDC3Q96DC8 MIR6875-201ENST00000617506 72 ntBASIC4□□□□□ -1.77
ECHDC3Q96DC8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms