Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 MIR4660-201ENST00000583549 74 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC022726.1-201ENST00000587475 207 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC100847.1-201ENST00000611316 481 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC123768.4-201ENST00000616244 701 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AL022401.1-201ENST00000619498 108 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC091304.6-201ENST00000619761 202 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC022079.1-201ENST00000621546 602 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC124312.6-202ENST00000623624 418 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC017037.3-201ENST00000625016 472 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 AC139713.2-214ENST00000642059 1811 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.88□□□□□ -1.63
HMGB4Q8WW32 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGB4Q8WW32 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 SAMMSON-213ENST00000641336 1521 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 SNORA73.1-201ENST00000363107 205 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 SNORA70F-201ENST00000384142 135 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 U3.22-201ENST00000391120 215 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 VDAC1P6-201ENST00000430062 855 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 SEPT7P5-201ENST00000434048 306 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC093155.1-201ENST00000440164 826 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 RAB11AP1-201ENST00000442978 646 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 RPL7P59-201ENST00000447700 943 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC000111.2-201ENST00000448200 210 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC013356.1-201ENST00000489027 564 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 SCARNA22-201ENST00000503991 125 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 TOMM20P2-201ENST00000540082 421 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AL354943.1-201ENST00000572103 781 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC124856.1-201ENST00000600819 896 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 BNIP3P26-201ENST00000600827 554 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC021171.1-201ENST00000603137 706 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 DUXAP3-201ENST00000603616 594 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AL139344.1-201ENST00000605228 195 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC010424.2-201ENST00000607594 443 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC097478.2-201ENST00000610572 514 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AC006338.2-201ENST00000616864 791 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AP001005.3-201ENST00000622049 129 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AF001550.2-201ENST00000636643 217 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
HMGB4Q8WW32 AL034370.1-201ENST00000397254 1590 ntBASIC4.87□□□□□ -1.63
HMGB4Q8WW32 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AL118496.1-201ENST00000440201 1812 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 ADAM5-202ENST00000399789 1942 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 FAM3C2-201ENST00000312214 681 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 RNY3P9-201ENST00000384727 106 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 TMSB4XP8-201ENST00000402089 135 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 NCSTNP1-201ENST00000406229 144 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 TMSB4XP6-201ENST00000415187 135 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 MRPS36P1-201ENST00000421291 307 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 RPS27AP7-201ENST00000422792 455 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 TMSB4XP1-201ENST00000424567 135 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 RPS26P47-201ENST00000427219 348 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 RPL23AP1-201ENST00000428990 471 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 USP9YP31-201ENST00000431405 881 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 PPIAP17-201ENST00000438507 471 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.86□□□□□ -1.63
HMGB4Q8WW32 MTCYBP11-201ENST00000447254 1109 ntBASIC4.86□□□□□ -1.63
HMGB4Q8WW32 AL591363.1-201ENST00000450091 483 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms