Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DDX18P3-201ENST00000404856 2007 ntBASIC2.56□□□□□ -2
ALMS1Q8TCU4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AL831737.1-201ENST00000441288 271 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 BTF3P5-201ENST00000457252 467 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 CCDC75P1-201ENST00000469247 791 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC113430.1-201ENST00000506872 718 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 PHBP17-201ENST00000528576 541 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AL008729.2-201ENST00000606393 473 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC107294.1-201ENST00000609524 467 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ALMS1Q8TCU4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ALMS1Q8TCU4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 RPL27AP5-201ENST00000469428 449 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC006539.2-201ENST00000601729 572 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AL365440.1-201ENST00000436135 2167 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.55□□□□□ -2
ALMS1Q8TCU4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC004656.1-201ENST00000568479 4951 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 SNORD105B-201ENST00000458770 79 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 TMED11P-201ENST00000479478 690 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC097462.2-201ENST00000504623 481 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 AC010591.1-201ENST00000603941 649 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 MIR7106-201ENST00000612419 65 ntBASIC2.55□□□□□ -2
ALMS1Q8TCU4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ALMS1Q8TCU4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ALMS1Q8TCU4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC2.55□□□□□ -2
ALMS1Q8TCU4 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 AC069306.1-201ENST00000507006 843 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 PHBP14-201ENST00000512887 367 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 MYL12AP1-201ENST00000518490 515 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 AC074140.1-201ENST00000621617 208 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 HMGB1P21-201ENST00000502313 581 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 AL355365.1-201ENST00000616480 294 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 AC110801.1-201ENST00000623590 212 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 MIR93-201ENST00000385024 80 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 RNA5SP104-201ENST00000410989 118 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 OSTCP5-201ENST00000425293 453 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 AC005019.1-201ENST00000436455 431 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 FABP3P2-201ENST00000453169 399 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 AL451049.1-201ENST00000608672 497 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC2.54□□□□□ -2
ALMS1Q8TCU4 ATE1-AS1-202ENST00000636460 506 ntBASIC2.54□□□□□ -2
ALMS1Q8TCU4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ALMS1Q8TCU4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ALMS1Q8TCU4 AC091862.1-201ENST00000438016 1100 ntBASIC2.53□□□□□ -2
ALMS1Q8TCU4 RPSAP41-201ENST00000439695 860 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms