Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC103710.3-201ENST00000608157 948 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC019193.2-201ENST00000610012 634 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC105429.2-201ENST00000610567 517 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AL121890.3-201ENST00000618494 516 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 CR392039.4-201ENST00000624968 501 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 AC027287.1-201ENST00000553115 1453 ntBASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLHC1Q8NHS4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 CCNB2P1-201ENST00000399411 1150 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AL138878.1-201ENST00000405131 347 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AL035696.2-201ENST00000407941 709 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 RNU4-25P-201ENST00000410569 230 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AC007064.3-201ENST00000422608 359 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AC017083.1-201ENST00000428093 483 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AL031663.1-201ENST00000437445 219 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 RPS4XP4-201ENST00000443195 763 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 TPMTP4-201ENST00000450749 678 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 HMGB3P22-202ENST00000451823 572 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AC009963.2-201ENST00000453431 138 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 RPS20P4-201ENST00000461659 355 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 RPL30P11-201ENST00000495304 339 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 SEC11B-201ENST00000518383 499 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 MTND1P6-201ENST00000523621 946 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 MIR5684-201ENST00000585074 65 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AC114781.5-201ENST00000615297 108 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 AL353743.4-201ENST00000422653 1547 ntBASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLHC1Q8NHS4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 MIR383-201ENST00000362257 73 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 RNA5SP443-201ENST00000363083 132 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 RNU6-618P-201ENST00000363518 112 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 BTF3P9-201ENST00000418784 283 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AC009480.2-201ENST00000422916 432 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 BTF3P10-201ENST00000433415 495 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 ACTR3P2-201ENST00000439585 1257 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 FCF1P7-201ENST00000451185 558 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 RNA5SP246-201ENST00000458909 119 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 RN7SL303P-201ENST00000469773 251 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 FTH1P24-201ENST00000503502 462 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AC093840.1-201ENST00000511599 336 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AC099522.1-202ENST00000514718 367 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 RNU2-58P-201ENST00000516403 183 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 PTP4A1P6-201ENST00000531034 478 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AC025627.2-201ENST00000576220 160 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 MIR4277-201ENST00000578298 84 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AC008745.1-201ENST00000604064 271 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AL356218.2-201ENST00000605264 187 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AL359715.4-201ENST00000606629 1436 ntBASIC3.87□□□□□ -1.79
CLHC1Q8NHS4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLHC1Q8NHS4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms