Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 Y_RNA.89-201ENST00000363031 102 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RNU4-76P-201ENST00000364509 141 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RNY4P34-201ENST00000364779 95 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RNU6-534P-201ENST00000364877 106 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RNU6-657P-201ENST00000383904 107 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 Y_RNA.608-201ENST00000410647 95 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 METTL15P3-201ENST00000415522 1221 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 USP9YP27-201ENST00000418455 438 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 MTCO2P11-201ENST00000431069 680 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 SNRPEP7-201ENST00000438350 220 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 LSM1P1-201ENST00000438629 273 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 FABP3P2-201ENST00000453169 399 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 Z82190.1-201ENST00000454534 490 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RN7SL254P-201ENST00000460609 284 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RN7SL188P-201ENST00000469842 285 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC091544.1-201ENST00000484702 348 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 KHDC1P1-201ENST00000511053 508 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC010493.1-201ENST00000513479 292 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC078899.1-201ENST00000521432 1185 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 OR5AP1P-201ENST00000529730 940 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC090502.2-201ENST00000549267 280 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AL157687.1-201ENST00000554853 619 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 CENPUP2-201ENST00000555897 1186 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 MIR3682-201ENST00000581338 84 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 UBE2V2P2-201ENST00000587677 504 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AL117336.2-201ENST00000602435 335 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 BNIP3P11-201ENST00000603878 563 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC010133.1-201ENST00000615809 842 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC073592.6-201ENST00000624271 415 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC079776.5-201ENST00000641920 211 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC002525.1-201ENST00000624392 1622 ntBASIC5.21□□□□□ -1.58
DTX3Q8N9I9 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DTX3Q8N9I9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 MRE11P1-201ENST00000464884 2127 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 THAP12P5-201ENST00000405864 2275 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AL078621.3-201ENST00000623707 2042 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 RN7SKP69-201ENST00000365390 305 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 RNU1-149P-201ENST00000390870 161 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AC087752.1-201ENST00000391360 558 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AC234782.4-201ENST00000417646 1048 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 MTCO1P20-201ENST00000425366 358 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AC138761.5-201ENST00000433967 325 ntBASIC5.2□□□□□ -1.58
DTX3Q8N9I9 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms