Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRK2Q5S007 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRK2Q5S007 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRK2Q5S007 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 RNA5SP306-201ENST00000411087 107 ntBASIC3.24□□□□□ -1.89
LRRK2Q5S007 AC017079.2-201ENST00000416102 485 ntBASIC3.24□□□□□ -1.89
LRRK2Q5S007 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.24□□□□□ -1.89
LRRK2Q5S007 HMGB3P9-201ENST00000441799 583 ntBASIC3.24□□□□□ -1.89
LRRK2Q5S007 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LRRK2Q5S007 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 AC104763.2-201ENST00000604179 382 ntBASIC3.24□□□□□ -1.89
LRRK2Q5S007 AL390816.3-201ENST00000604527 1066 ntBASIC3.24□□□□□ -1.89
LRRK2Q5S007 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
LRRK2Q5S007 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRK2Q5S007 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LRRK2Q5S007 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRK2Q5S007 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 RPL7P60-201ENST00000397636 735 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 PGBD4P8-201ENST00000412993 562 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 U3.44-201ENST00000458938 192 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC080014.1-201ENST00000496877 1201 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 VN1R104P-201ENST00000505115 1009 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC008802.1-201ENST00000519121 791 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 PRELID3BP3-201ENST00000584963 545 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC125494.3-201ENST00000602759 455 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 TUG1_1.1-201ENST00000610654 145 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC124312.6-202ENST00000623624 418 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 OR56B2P-201ENST00000317102 954 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 SNORA80A-201ENST00000363922 136 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 RPF2P1-201ENST00000424137 906 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 RPL7P59-201ENST00000447700 943 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC084198.1-201ENST00000477747 402 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC090013.1-201ENST00000485147 480 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC138409.2-202ENST00000507274 458 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 AL354760.1-201ENST00000608357 643 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 AP001153.1-201ENST00000641024 338 ntBASIC3.23□□□□□ -1.89
LRRK2Q5S007 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LRRK2Q5S007 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRRK2Q5S007 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRRK2Q5S007 AC011755.1-201ENST00000623763 2049 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRK2Q5S007 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRK2Q5S007 AC003685.2-201ENST00000422795 395 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 AC026784.1-201ENST00000507986 352 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 AC135001.1-201ENST00000544546 283 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 AC079171.1-201ENST00000568788 914 ntBASIC3.22□□□□□ -1.89
LRRK2Q5S007 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
LRRK2Q5S007 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRRK2Q5S007 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms