Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 MIR30B-201ENST00000384850 88 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 MIR92A2-201ENST00000385299 75 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 MIR320B1-201ENST00000390209 79 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AL121834.1-202ENST00000404494 277 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RAB9AP3-201ENST00000412737 573 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AC093578.1-201ENST00000415219 368 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 OR4F13P-201ENST00000428478 931 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RPL37P1-201ENST00000432310 284 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 ARL5AP3-201ENST00000439327 386 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AC114878.1-201ENST00000441166 358 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AL358232.1-201ENST00000448030 501 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 VN1R48P-201ENST00000448149 1036 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RAB9AP1-201ENST00000449393 573 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RNU7-27P-201ENST00000459281 62 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 OR9M1P-201ENST00000459641 921 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RPL7P1-201ENST00000468161 747 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RPL7P9-201ENST00000468715 747 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AC022034.3-201ENST00000471393 478 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AC005912.1-201ENST00000495392 255 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 HMGB3P13-201ENST00000511263 607 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 RNU7-143P-201ENST00000516781 65 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 OR4V1P-201ENST00000525394 1140 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AC068020.1-201ENST00000594215 661 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 AC023509.5-201ENST00000617434 807 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SHROOM1Q2M3G4 OR11H5P-202ENST00000641612 1325 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 SAGE2P-201ENST00000420011 2126 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 LINC01881-201ENST00000416103 412 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 NPM1P24-201ENST00000428039 894 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 TRIM60P13-201ENST00000432350 1283 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC007389.2-201ENST00000434630 306 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC007688.1-201ENST00000475592 759 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 PCNAP1-201ENST00000505363 709 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC093853.1-201ENST00000515689 483 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC007991.1-201ENST00000522680 631 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 DEFB109D-201ENST00000529497 240 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 YPEL5P3-201ENST00000547227 352 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC025627.2-201ENST00000576220 160 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC015726.1-201ENST00000602353 681 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 ABI1P1-201ENST00000603375 1120 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AC138907.10-201ENST00000623708 983 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 AL118508.4-201ENST00000624142 1176 ntBASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SHROOM1Q2M3G4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 SNORD35B-201ENST00000363660 87 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 RNA5SP399-201ENST00000364003 117 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 PTMAP2-201ENST00000397627 327 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 VN1R8P-201ENST00000407739 893 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AL138785.1-201ENST00000425821 331 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 RNF19BPX-201ENST00000426224 625 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 PRELID3BP10-201ENST00000431957 584 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 MTCO1P57-201ENST00000432182 261 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 SCARNA14-201ENST00000516903 136 ntBASIC4.72□□□□□ -1.65
SHROOM1Q2M3G4 RNA5SP179-201ENST00000517284 121 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms