Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFX7Q2KHR2 AL050321.1-201ENST00000432363 400 ntBASIC4.6□□□□□ -1.67
RFX7Q2KHR2 IGKV2D-19-201ENST00000523346 262 ntBASIC4.6□□□□□ -1.67
RFX7Q2KHR2 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.6□□□□□ -1.67
RFX7Q2KHR2 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.6□□□□□ -1.67
RFX7Q2KHR2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.6□□□□□ -1.67
RFX7Q2KHR2 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.6□□□□□ -1.67
RFX7Q2KHR2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.6□□□□□ -1.67
RFX7Q2KHR2 BNIP3P19-201ENST00000605397 577 ntBASIC4.6□□□□□ -1.67
RFX7Q2KHR2 AC005972.3-201ENST00000606304 481 ntBASIC4.6□□□□□ -1.67
RFX7Q2KHR2 SNORA62.6-201ENST00000606322 83 ntBASIC4.6□□□□□ -1.67
RFX7Q2KHR2 AC091953.5-201ENST00000622919 233 ntBASIC4.6□□□□□ -1.67
RFX7Q2KHR2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RFX7Q2KHR2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 IFNNP1-201ENST00000429219 553 ntBASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 PRSS3P4-201ENST00000453323 162 ntBASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AC010342.1-201ENST00000514047 877 ntBASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AF186190.1-201ENST00000517470 480 ntBASIC4.59□□□□□ -1.67
RFX7Q2KHR2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 OR4A2P-201ENST00000527276 913 ntBASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 MIR5187-201ENST00000583479 76 ntBASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AC026368.1-201ENST00000614934 690 ntBASIC4.59□□□□□ -1.67
RFX7Q2KHR2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.59□□□□□ -1.67
RFX7Q2KHR2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.59□□□□□ -1.68
RFX7Q2KHR2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
RFX7Q2KHR2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RFX7Q2KHR2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RFX7Q2KHR2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RFX7Q2KHR2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC018529.3-201ENST00000624212 2254 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 LINC00561-201ENST00000565815 2738 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 MIR137-201ENST00000385223 102 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 MTND2P25-201ENST00000449028 610 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 UBDP1-202ENST00000457888 382 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC018635.1-201ENST00000468292 1030 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 RPL23AP71-201ENST00000470966 469 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC108941.1-201ENST00000502853 530 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 RN7SKP209-201ENST00000516888 304 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 SUMO2P20-201ENST00000520803 283 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC244505.7-201ENST00000599675 272 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AL354760.1-201ENST00000608357 643 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC091905.1-201ENST00000624400 311 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.58□□□□□ -1.68
RFX7Q2KHR2 OR5AC4P-202ENST00000642086 985 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 MAPK10-373ENST00000641983 6772 ntBASIC4.58□□□□□ -1.68
RFX7Q2KHR2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 OR52B1P-201ENST00000316506 909 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 RNA5SP322-201ENST00000363617 119 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 SNORD3H-201ENST00000384486 214 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 HMGN2P8-201ENST00000391458 268 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 ATP5F1P4-201ENST00000397288 746 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 SNORA3.3-201ENST00000408712 125 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AC008280.1-201ENST00000418851 412 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AL691447.1-201ENST00000419456 387 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 RPL21P109-201ENST00000422213 475 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 SNORA71B-202ENST00000439232 272 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 SETD6P1-201ENST00000444575 317 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AC006480.1-201ENST00000449887 378 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AC113430.1-201ENST00000506872 718 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 RN7SL339P-201ENST00000580597 296 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AC096553.1-201ENST00000605169 829 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AL034408.1-202ENST00000636088 415 ntBASIC4.57□□□□□ -1.68
RFX7Q2KHR2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFX7Q2KHR2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms