Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL7AP14-201ENST00000424041 802 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 MTCO3P46-201ENST00000425787 232 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 FAM103A2P-201ENST00000444122 354 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AL035551.1-201ENST00000446931 348 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AC004980.3-201ENST00000447046 365 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 GAPDHP14-201ENST00000450472 937 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 RPS27AP17-201ENST00000463344 455 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC103851.1-201ENST00000506833 274 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.02□□□□□ -1.45
PCDH1Q08174 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC138517.1-201ENST00000515724 568 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 RNA5SP401-201ENST00000515920 127 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 SNORA40.12-201ENST00000516329 111 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 OR5B19P-201ENST00000531766 928 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 HMGB1P42-201ENST00000532126 553 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AC024405.1-201ENST00000532521 1042 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AC036111.2-201ENST00000533247 901 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.02□□□□□ -1.45
PCDH1Q08174 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 U1.25-201ENST00000614085 162 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 U6.101-201ENST00000637707 76 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 CASC19-246ENST00000641625 1606 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDH1Q08174 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 AP001541.1-201ENST00000623322 1904 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PCDH1Q08174 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 RNA5SP485-201ENST00000365053 119 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDH1Q08174 RNU6-1158P-201ENST00000391167 107 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 SNORA11.5-201ENST00000408163 128 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 RN7SKP29-201ENST00000410957 272 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.01□□□□□ -1.45
PCDH1Q08174 AC013429.2-201ENST00000418798 781 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC015977.1-201ENST00000418887 292 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDH1Q08174 ELOCP4-201ENST00000420090 333 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDH1Q08174 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDH1Q08174 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 AC094019.1-201ENST00000434678 472 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDH1Q08174 PPIAP10-201ENST00000438675 458 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDH1Q08174 AC016691.1-201ENST00000441321 413 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC245291.3-201ENST00000443400 292 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AL645937.3-201ENST00000453647 936 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC099670.1-201ENST00000455141 783 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC005165.2-201ENST00000466070 380 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 SNX18P24-201ENST00000505249 671 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 RNA5SP434-201ENST00000516647 121 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.01□□□□□ -1.45
PCDH1Q08174 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDH1Q08174 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms