Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN6P56747 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN6P56747 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.93□□□□□ -1.78
CLDN6P56747 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN6P56747 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLDN6P56747 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN6P56747 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN6P56747 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLDN6P56747 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLDN6P56747 RNU6-618P-201ENST00000363518 112 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN6P56747 RNU6-532P-201ENST00000384318 107 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 SNORD3H-201ENST00000384486 214 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 MIR320B1-201ENST00000390209 79 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 AL078604.1-201ENST00000404609 466 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN6P56747 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN6P56747 OR2X1P-201ENST00000421144 687 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 AJ239321.1-201ENST00000424255 564 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 AC091390.3-201ENST00000426478 338 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 OR4F13P-201ENST00000428478 931 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN6P56747 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN6P56747 RN7SL323P-201ENST00000494712 295 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 DSTNP2-201ENST00000504533 515 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 AC117525.1-201ENST00000515228 503 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 RN7SKP141-201ENST00000516167 338 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 SNORA74D-201ENST00000516404 141 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 AC008694.2-201ENST00000517591 306 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.92□□□□□ -1.78
CLDN6P56747 MTND6P33-201ENST00000571794 183 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.92□□□□□ -1.78
CLDN6P56747 AC068020.1-201ENST00000594215 661 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.92□□□□□ -1.78
CLDN6P56747 AC017076.1-201ENST00000607613 578 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 AL391261.4-201ENST00000616012 481 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.92□□□□□ -1.78
CLDN6P56747 AC074029.4-201ENST00000624796 1859 ntBASIC3.92□□□□□ -1.78
CLDN6P56747 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLDN6P56747 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.92□□□□□ -1.78
CLDN6P56747 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN6P56747 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLDN6P56747 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 SNORA5A-201ENST00000384111 134 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN6P56747 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLDN6P56747 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN6P56747 UBTFL3-201ENST00000418934 1024 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN6P56747 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN6P56747 RPS3AP12-201ENST00000443616 753 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 VN1R48P-201ENST00000448149 1036 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 PLGLA-201ENST00000465668 449 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN6P56747 UBTFL6-201ENST00000477929 1024 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.91□□□□□ -1.78
CLDN6P56747 AC147055.1-201ENST00000509261 750 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 RNU1-95P-201ENST00000516357 160 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 RNU1-128P-201ENST00000516704 160 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 AC067904.2-201ENST00000517322 1283 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN6P56747 AC026403.1-201ENST00000518938 295 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 VTA1P2-201ENST00000520205 911 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 IGLV3-26-201ENST00000520756 302 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 AC090819.1-201ENST00000523800 1111 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.91□□□□□ -1.78
CLDN6P56747 RPL23AP97-201ENST00000568955 471 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN6P56747 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN6P56747 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN6P56747 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN6P56747 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN6P56747 AL138721.1-201ENST00000616756 179 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 AL645927.2-201ENST00000618350 349 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 MIR7154-201ENST00000620673 73 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 RPL23AP61-201ENST00000623642 466 ntBASIC3.91□□□□□ -1.78
CLDN6P56747 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms