Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HDAC4P56524 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HDAC4P56524 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HDAC4P56524 RN7SKP267-201ENST00000410381 285 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 AC009237.10-201ENST00000414112 510 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 OR2X1P-201ENST00000421144 687 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 AC073069.1-201ENST00000428657 441 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 YWHAEP5-201ENST00000431545 765 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 RPS26P2-201ENST00000440331 348 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 ELOCP13-201ENST00000443934 329 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 AC068135.1-201ENST00000446164 246 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HDAC4P56524 AL050341.1-201ENST00000447743 313 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 RPL7P32-201ENST00000457119 744 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 RPL6P9-201ENST00000466502 859 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 RN7SL738P-201ENST00000470264 297 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.85□□□□□ -1.63
HDAC4P56524 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.85□□□□□ -1.63
HDAC4P56524 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.85□□□□□ -1.63
HDAC4P56524 EEF1A1P37-201ENST00000522748 715 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 OR5M2P-201ENST00000529003 936 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 AC087897.1-201ENST00000550134 156 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 MTCYBP23-201ENST00000558717 1102 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.85□□□□□ -1.63
HDAC4P56524 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.85□□□□□ -1.63
HDAC4P56524 AC209154.1-201ENST00000582156 337 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 AC115085.1-201ENST00000588924 229 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.85□□□□□ -1.63
HDAC4P56524 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 AC026368.1-201ENST00000614934 690 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 SNX18P1Y-201ENST00000616231 511 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 CR392039.4-201ENST00000624968 501 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 AC135352.1-201ENST00000506173 1418 ntBASIC4.85□□□□□ -1.63
HDAC4P56524 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HDAC4P56524 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HDAC4P56524 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.84□□□□□ -1.63
HDAC4P56524 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDAC4P56524 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDAC4P56524 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDAC4P56524 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HDAC4P56524 USP9YP4-201ENST00000424401 1745 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.84□□□□□ -1.63
HDAC4P56524 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDAC4P56524 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HDAC4P56524 OR56B2P-201ENST00000317102 954 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 ANAPC10P1-201ENST00000395991 556 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 LAP3P1-201ENST00000403648 294 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 RPL23AP48-201ENST00000406913 488 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 RPL31P52-201ENST00000407532 367 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.84□□□□□ -1.63
HDAC4P56524 AC092745.2-202ENST00000411880 369 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 MTATP6P20-201ENST00000414147 562 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.84□□□□□ -1.63
HDAC4P56524 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
HDAC4P56524 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.84□□□□□ -1.63
HDAC4P56524 ELOCP11-201ENST00000436690 332 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.84□□□□□ -1.63
HDAC4P56524 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 ELOCP16-201ENST00000444494 332 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.84□□□□□ -1.63
HDAC4P56524 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 TRBV8-2-201ENST00000475637 270 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 MTCO3P35-201ENST00000485582 781 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 AC023050.1-201ENST00000498198 304 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HDAC4P56524 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.84□□□□□ -1.63
HDAC4P56524 IGKV2-36-201ENST00000519999 223 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.84□□□□□ -1.63
HDAC4P56524 OR10V3P-201ENST00000525712 725 ntBASIC4.84□□□□□ -1.63
HDAC4P56524 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms