Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.37□□□□□ -1.39
EPHA4P54764 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.37□□□□□ -1.39
EPHA4P54764 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHA4P54764 AC026898.1-201ENST00000586404 571 ntBASIC6.37□□□□□ -1.39
EPHA4P54764 AP001029.3-201ENST00000588063 596 ntBASIC6.37□□□□□ -1.39
EPHA4P54764 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.37□□□□□ -1.39
EPHA4P54764 APOOP1-201ENST00000604695 592 ntBASIC6.37□□□□□ -1.39
EPHA4P54764 OR6R2P-201ENST00000609216 300 ntBASIC6.37□□□□□ -1.39
EPHA4P54764 uc_338.12-201ENST00000616344 181 ntBASIC6.37□□□□□ -1.39
EPHA4P54764 MIR6806-201ENST00000622141 64 ntBASIC6.37□□□□□ -1.39
EPHA4P54764 AC091925.1-201ENST00000623204 462 ntBASIC6.37□□□□□ -1.39
EPHA4P54764 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.37□□□□□ -1.39
EPHA4P54764 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHA4P54764 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHA4P54764 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.37□□□□□ -1.39
EPHA4P54764 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
EPHA4P54764 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.37□□□□□ -1.39
EPHA4P54764 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
EPHA4P54764 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHA4P54764 SNX18P3-202ENST00000565670 1750 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHA4P54764 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHA4P54764 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
EPHA4P54764 Y_RNA.133-201ENST00000363428 110 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 Y_RNA.367-201ENST00000365544 101 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 SNORA22B-201ENST00000383876 138 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 RNU6-1207P-201ENST00000384343 107 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 SNORD116-29-201ENST00000384516 83 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 Y_RNA.530-201ENST00000384587 101 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 MIR621-201ENST00000384919 96 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 MTCYBP4-201ENST00000401524 249 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 AL356057.3-201ENST00000402607 340 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHA4P54764 AC012065.2-201ENST00000421295 375 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 RPL34P3-201ENST00000421454 338 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 AL138799.3-201ENST00000438968 350 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHA4P54764 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHA4P54764 AC107399.1-201ENST00000451226 265 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 AC118758.1-202ENST00000454719 225 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 AC126389.1-201ENST00000477436 290 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 FAM206BP-201ENST00000510179 541 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 RPL39P5-202ENST00000512505 151 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHA4P54764 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHA4P54764 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHA4P54764 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHA4P54764 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHA4P54764 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHA4P54764 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHA4P54764 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHA4P54764 MIR3154-201ENST00000577829 84 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHA4P54764 GLUD1P4-201ENST00000590914 418 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHA4P54764 7SK.7-201ENST00000603504 247 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 AL022099.1-201ENST00000604551 712 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHA4P54764 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
EPHA4P54764 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 AC127070.3-201ENST00000503695 3263 ntBASIC6.36□□□□□ -1.39
EPHA4P54764 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHA4P54764 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHA4P54764 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHA4P54764 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHA4P54764 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHA4P54764 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHA4P54764 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
EPHA4P54764 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHA4P54764 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
EPHA4P54764 RNU6-1309P-201ENST00000363305 108 ntBASIC6.35□□□□□ -1.39
EPHA4P54764 RNU6-97P-201ENST00000363387 104 ntBASIC6.35□□□□□ -1.39
EPHA4P54764 AC117470.1-201ENST00000381974 330 ntBASIC6.35□□□□□ -1.39
EPHA4P54764 Y_RNA.395-201ENST00000383945 109 ntBASIC6.35□□□□□ -1.39
EPHA4P54764 RNU6-1105P-201ENST00000384774 107 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms