Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.34□□□□□ -1.71
PDX1P52945 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.34□□□□□ -1.71
PDX1P52945 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 RNU4-44P-201ENST00000363050 141 ntBASIC4.34□□□□□ -1.71
PDX1P52945 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.34□□□□□ -1.71
PDX1P52945 RPS12P10-201ENST00000427031 377 ntBASIC4.34□□□□□ -1.71
PDX1P52945 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.34□□□□□ -1.71
PDX1P52945 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.34□□□□□ -1.71
PDX1P52945 CBX1P4-201ENST00000439415 457 ntBASIC4.34□□□□□ -1.71
PDX1P52945 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 RNU7-140P-201ENST00000459546 60 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AC091153.1-201ENST00000466297 402 ntBASIC4.34□□□□□ -1.71
PDX1P52945 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.34□□□□□ -1.71
PDX1P52945 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 AP001207.2-201ENST00000519490 539 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.34□□□□□ -1.71
PDX1P52945 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 POLR2KP1-201ENST00000553226 168 ntBASIC4.34□□□□□ -1.71
PDX1P52945 ZNF971P-201ENST00000562068 1249 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AC106785.1-201ENST00000565935 262 ntBASIC4.34□□□□□ -1.71
PDX1P52945 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 AC023824.3-201ENST00000569003 562 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.34□□□□□ -1.71
PDX1P52945 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 AC125494.3-201ENST00000602759 455 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AC020634.1-201ENST00000608701 549 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AC097505.1-201ENST00000610199 565 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AC023043.4-201ENST00000612081 449 ntBASIC4.34□□□□□ -1.71
PDX1P52945 CYCSP41-201ENST00000616920 296 ntBASIC4.34□□□□□ -1.71
PDX1P52945 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 MAPK10-304ENST00000641341 3984 ntBASIC4.34□□□□□ -1.71
PDX1P52945 BTBD10P1-201ENST00000549824 1352 ntBASIC4.34□□□□□ -1.71
PDX1P52945 AL391684.1-202ENST00000641293 1636 ntBASIC4.34□□□□□ -1.71
PDX1P52945 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.34□□□□□ -1.71
PDX1P52945 AC009313.2-201ENST00000417893 1941 ntBASIC4.34□□□□□ -1.71
PDX1P52945 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PDX1P52945 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PDX1P52945 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PDX1P52945 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDX1P52945 AC006971.1-201ENST00000407916 4486 ntBASIC4.34□□□□□ -1.72
PDX1P52945 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDX1P52945 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDX1P52945 Z95327.2-201ENST00000414579 1873 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AC093775.1-201ENST00000624154 1868 ntBASIC4.33□□□□□ -1.72
PDX1P52945 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.33□□□□□ -1.72
PDX1P52945 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PDX1P52945 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDX1P52945 OR56B2P-201ENST00000317102 954 ntBASIC4.33□□□□□ -1.72
PDX1P52945 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDX1P52945 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDX1P52945 RNA5SP366-201ENST00000365454 123 ntBASIC4.33□□□□□ -1.72
PDX1P52945 RNU6-317P-201ENST00000384031 107 ntBASIC4.33□□□□□ -1.72
PDX1P52945 MIR134-201ENST00000385258 73 ntBASIC4.33□□□□□ -1.72
PDX1P52945 SNORD96B-201ENST00000386148 79 ntBASIC4.33□□□□□ -1.72
PDX1P52945 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDX1P52945 ATP5F1P2-201ENST00000398143 760 ntBASIC4.33□□□□□ -1.72
PDX1P52945 VDAC2P1-201ENST00000399358 958 ntBASIC4.33□□□□□ -1.72
PDX1P52945 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.33□□□□□ -1.72
PDX1P52945 RNA5SP317-201ENST00000410176 116 ntBASIC4.33□□□□□ -1.72
PDX1P52945 RNA5SP311-201ENST00000411290 116 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.33□□□□□ -1.72
PDX1P52945 USP9YP21-201ENST00000420603 432 ntBASIC4.33□□□□□ -1.72
PDX1P52945 Z74021.1-201ENST00000423610 407 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AC114973.1-201ENST00000429057 632 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AC011998.1-201ENST00000433403 117 ntBASIC4.33□□□□□ -1.72
PDX1P52945 HMGB1P45-201ENST00000435986 653 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AC092170.1-201ENST00000440211 356 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 CDC27P1-201ENST00000445384 715 ntBASIC4.33□□□□□ -1.72
PDX1P52945 TPTE2P6-202ENST00000445572 1007 ntBASIC4.33□□□□□ -1.72
PDX1P52945 PHBP16-201ENST00000446318 950 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.33□□□□□ -1.72
PDX1P52945 AL591623.2-201ENST00000449978 222 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AL591363.1-201ENST00000450091 483 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AL009048.1-201ENST00000450437 298 ntBASIC4.33□□□□□ -1.72
PDX1P52945 DNAJC19P8-201ENST00000452887 259 ntBASIC4.33□□□□□ -1.72
PDX1P52945 ISCUP1-201ENST00000454451 448 ntBASIC4.33□□□□□ -1.72
PDX1P52945 DHFRP3-201ENST00000455595 559 ntBASIC4.33□□□□□ -1.72
PDX1P52945 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PDX1P52945 UQCRHP4-201ENST00000471686 272 ntBASIC4.33□□□□□ -1.72
PDX1P52945 TRBV8-2-201ENST00000475637 270 ntBASIC4.33□□□□□ -1.72
PDX1P52945 TRAV31-201ENST00000502780 342 ntBASIC4.33□□□□□ -1.72
PDX1P52945 AC010460.2-201ENST00000509054 677 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms