Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.19□□□□□ -1.58
NEK3P51956 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 Y_RNA.25-201ENST00000362528 102 ntBASIC5.19□□□□□ -1.58
NEK3P51956 Y_RNA.192-201ENST00000363977 102 ntBASIC5.19□□□□□ -1.58
NEK3P51956 MIR937-201ENST00000401271 86 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AL359643.1-201ENST00000404109 423 ntBASIC5.19□□□□□ -1.58
NEK3P51956 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.19□□□□□ -1.58
NEK3P51956 AC069218.2-201ENST00000411665 344 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AL161449.1-201ENST00000414531 1199 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.19□□□□□ -1.58
NEK3P51956 SDCBPP2-201ENST00000424643 885 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.19□□□□□ -1.58
NEK3P51956 OR4F13P-201ENST00000428478 931 ntBASIC5.19□□□□□ -1.58
NEK3P51956 RBMY2QP-201ENST00000429799 1147 ntBASIC5.19□□□□□ -1.58
NEK3P51956 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.19□□□□□ -1.58
NEK3P51956 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.19□□□□□ -1.58
NEK3P51956 RPL21P134-201ENST00000453468 483 ntBASIC5.19□□□□□ -1.58
NEK3P51956 USP9YP25-201ENST00000457708 443 ntBASIC5.19□□□□□ -1.58
NEK3P51956 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.19□□□□□ -1.58
NEK3P51956 AC231760.1-201ENST00000498002 260 ntBASIC5.19□□□□□ -1.58
NEK3P51956 NDUFB5P1-201ENST00000508134 564 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC112673.1-201ENST00000513168 575 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC138938.1-201ENST00000515431 782 ntBASIC5.19□□□□□ -1.58
NEK3P51956 FABP5P12-201ENST00000515543 389 ntBASIC5.19□□□□□ -1.58
NEK3P51956 RNA5SP464-201ENST00000516251 108 ntBASIC5.19□□□□□ -1.58
NEK3P51956 RN7SKP31-201ENST00000516354 278 ntBASIC5.19□□□□□ -1.58
NEK3P51956 ZNF705CP-201ENST00000530515 889 ntBASIC5.19□□□□□ -1.58
NEK3P51956 PTP4A1P6-201ENST00000531034 478 ntBASIC5.19□□□□□ -1.58
NEK3P51956 PDCD5P1-201ENST00000543528 309 ntBASIC5.19□□□□□ -1.58
NEK3P51956 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 AC010198.2-201ENST00000550612 259 ntBASIC5.19□□□□□ -1.58
NEK3P51956 SETP1-201ENST00000556014 845 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 RN7SL435P-201ENST00000584418 282 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC091946.2-201ENST00000606105 291 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC133644.2-201ENST00000608142 540 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC093799.2-201ENST00000610062 578 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC087683.2-201ENST00000611384 326 ntBASIC5.19□□□□□ -1.58
NEK3P51956 EIF3FP1-201ENST00000613970 806 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AC121761.2-201ENST00000617300 689 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.19□□□□□ -1.58
NEK3P51956 AC000123.2-201ENST00000623124 461 ntBASIC5.19□□□□□ -1.58
NEK3P51956 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.19□□□□□ -1.58
NEK3P51956 BMS1P21-201ENST00000634565 365 ntBASIC5.19□□□□□ -1.58
NEK3P51956 MIR4496-201ENST00000635896 61 ntBASIC5.19□□□□□ -1.58
NEK3P51956 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 AL596275.2-204ENST00000641628 552 ntBASIC5.19□□□□□ -1.58
NEK3P51956 AL596275.2-206ENST00000641957 626 ntBASIC5.19□□□□□ -1.58
NEK3P51956 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NEK3P51956 AC126323.6-202ENST00000568092 3511 ntBASIC5.19□□□□□ -1.58
NEK3P51956 ZNF652P1-201ENST00000442420 1309 ntBASIC5.19□□□□□ -1.58
NEK3P51956 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
NEK3P51956 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NEK3P51956 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NEK3P51956 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NEK3P51956 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.18□□□□□ -1.58
NEK3P51956 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NEK3P51956 FAM133CP-201ENST00000332869 704 ntBASIC5.18□□□□□ -1.58
NEK3P51956 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NEK3P51956 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NEK3P51956 TAF9BP1-201ENST00000396646 746 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AL133270.1-201ENST00000402635 279 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AL035079.1-201ENST00000405210 287 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AL390316.1-201ENST00000406279 553 ntBASIC5.18□□□□□ -1.58
NEK3P51956 RN7SKP114-201ENST00000410327 279 ntBASIC5.18□□□□□ -1.58
NEK3P51956 RNU2-42P-201ENST00000410697 113 ntBASIC5.18□□□□□ -1.58
NEK3P51956 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.18□□□□□ -1.58
NEK3P51956 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 AL050321.1-201ENST00000432363 400 ntBASIC5.18□□□□□ -1.58
NEK3P51956 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.18□□□□□ -1.58
NEK3P51956 PSMD10P3-201ENST00000437000 448 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.18□□□□□ -1.58
NEK3P51956 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.18□□□□□ -1.58
NEK3P51956 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.18□□□□□ -1.58
NEK3P51956 AC108463.1-201ENST00000450258 347 ntBASIC5.18□□□□□ -1.58
NEK3P51956 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.18□□□□□ -1.58
NEK3P51956 TRBV26-201ENST00000456572 344 ntBASIC5.18□□□□□ -1.58
NEK3P51956 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.18□□□□□ -1.58
NEK3P51956 HMGB3P16-201ENST00000508037 287 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms