Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCNKAP51800 SCARNA10-201ENST00000459255 330 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 RPL5P30-201ENST00000465511 891 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 OR52A4P-201ENST00000472867 958 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AC006463.2-201ENST00000473326 348 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AC079203.1-201ENST00000487972 404 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CLCNKAP51800 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AK3P4-201ENST00000504283 583 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AC111000.3-201ENST00000508057 576 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AC119751.1-201ENST00000513357 765 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 SNORD116-26-201ENST00000516006 96 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 RNA5SP360-201ENST00000516555 118 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AP000827.1-201ENST00000527814 258 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCNKAP51800 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCNKAP51800 HMGB3P26-201ENST00000560051 582 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AC027104.1-201ENST00000563702 681 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AC095057.3-201ENST00000567102 1157 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AL133338.2-201ENST00000604292 736 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 uc_338.9-201ENST00000617424 182 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 STMN1P1-201ENST00000617809 440 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 MIR7641-1-201ENST00000627518 61 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCNKAP51800 AC017104.5-201ENST00000637647 639 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLCNKAP51800 BX649567.1-201ENST00000642071 1134 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCNKAP51800 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 MAPK10-286ENST00000641208 8747 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCNKAP51800 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 OR14L1P-202ENST00000641545 3009 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CLCNKAP51800 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCNKAP51800 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 AL133268.1-201ENST00000405676 1401 ntBASIC4.55□□□□□ -1.68
CLCNKAP51800 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCNKAP51800 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC015813.6-201ENST00000624409 5808 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.54□□□□□ -1.68
CLCNKAP51800 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLCNKAP51800 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLCNKAP51800 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.54□□□□□ -1.68
CLCNKAP51800 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLCNKAP51800 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCNKAP51800 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCNKAP51800 OR52B1P-201ENST00000316506 909 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 RNU1-32P-201ENST00000363937 159 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 RNU6-224P-201ENST00000384055 107 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 MIR513B-201ENST00000385136 84 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 RNU6-1242P-201ENST00000391052 103 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 RNA5SP332-201ENST00000391063 115 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AL807761.1-201ENST00000417622 171 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 OR2X1P-201ENST00000421144 687 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.54□□□□□ -1.68
CLCNKAP51800 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 RPL23AP1-201ENST00000428990 471 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 ARL2BPP10-201ENST00000446487 531 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 RPL23AP12-201ENST00000467573 473 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC098799.3-201ENST00000506095 438 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC090819.1-201ENST00000523800 1111 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC079075.1-201ENST00000559543 878 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 CYP2C60P-201ENST00000566088 139 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 ZNF92P3-201ENST00000596594 954 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AC125494.3-201ENST00000602759 455 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCNKAP51800 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.54□□□□□ -1.68
CLCNKAP51800 SNORD91B-202ENST00000608459 222 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AL355493.4-201ENST00000618530 292 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC011330.2-201ENST00000621680 635 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AC024595.1-201ENST00000623088 387 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AP002791.1-201ENST00000623291 381 ntBASIC4.54□□□□□ -1.68
CLCNKAP51800 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCNKAP51800 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCNKAP51800 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.54□□□□□ -1.68
CLCNKAP51800 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCNKAP51800 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCNKAP51800 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms